Literature DB >> 22462987

Using time-delayed mutual information to discover and interpret temporal correlation structure in complex populations.

D J Albers1, George Hripcsak.   

Abstract

This paper addresses how to calculate and interpret the time-delayed mutual information (TDMI) for a complex, diversely and sparsely measured, possibly non-stationary population of time-series of unknown composition and origin. The primary vehicle used for this analysis is a comparison between the time-delayed mutual information averaged over the population and the time-delayed mutual information of an aggregated population (here, aggregation implies the population is conjoined before any statistical estimates are implemented). Through the use of information theoretic tools, a sequence of practically implementable calculations are detailed that allow for the average and aggregate time-delayed mutual information to be interpreted. Moreover, these calculations can also be used to understand the degree of homo or heterogeneity present in the population. To demonstrate that the proposed methods can be used in nearly any situation, the methods are applied and demonstrated on the time series of glucose measurements from two different subpopulations of individuals from the Columbia University Medical Center electronic health record repository, revealing a picture of the composition of the population as well as physiological features.

Entities:  

Mesh:

Year:  2012        PMID: 22462987      PMCID: PMC3277606          DOI: 10.1063/1.3675621

Source DB:  PubMed          Journal:  Chaos        ISSN: 1054-1500            Impact factor:   3.642


  4 in total

1.  Use and abuse of computer-stored medical records.

Authors:  J van der Lei
Journal:  Methods Inf Med       Date:  1991-04       Impact factor: 2.176

Review 2.  Accuracy of data in computer-based patient records.

Authors:  W R Hogan; M M Wagner
Journal:  J Am Med Inform Assoc       Date:  1997 Sep-Oct       Impact factor: 4.497

3.  A statistical dynamics approach to the study of human health data: resolving population scale diurnal variation in laboratory data.

Authors:  D J Albers; George Hripcsak
Journal:  Phys Lett A       Date:  2010-02-15       Impact factor: 2.654

4.  Modelling hepatitis C virus kinetics during treatment with pegylated interferon alpha-2b: errors in the estimation of viral kinetic parameters.

Authors:  E Shudo; R M Ribeiro; A S Perelson
Journal:  J Viral Hepat       Date:  2008-05       Impact factor: 3.728

  4 in total
  18 in total

1.  Estimation of time-delayed mutual information and bias for irregularly and sparsely sampled time-series.

Authors:  D J Albers; George Hripcsak
Journal:  Chaos Solitons Fractals       Date:  2012-06-01       Impact factor: 5.944

2.  Survival Analysis with Electronic Health Record Data: Experiments with Chronic Kidney Disease.

Authors:  Yolanda Hagar; David Albers; Rimma Pivovarov; Herbert Chase; Vanja Dukic; Noémie Elhadad
Journal:  Stat Anal Data Min       Date:  2014-08-19       Impact factor: 1.051

3.  WebDISCO: a web service for distributed cox model learning without patient-level data sharing.

Authors:  Chia-Lun Lu; Shuang Wang; Zhanglong Ji; Yuan Wu; Li Xiong; Xiaoqian Jiang; Lucila Ohno-Machado
Journal:  J Am Med Inform Assoc       Date:  2015-07-09       Impact factor: 4.497

4.  Yield and bias in defining a cohort study baseline from electronic health record data.

Authors:  Jason L Vassy; Yuk-Lam Ho; Jacqueline Honerlaw; Kelly Cho; J Michael Gaziano; Peter W F Wilson; David R Gagnon
Journal:  J Biomed Inform       Date:  2018-01-03       Impact factor: 6.317

5.  Comparing lagged linear correlation, lagged regression, Granger causality, and vector autoregression for uncovering associations in EHR data.

Authors:  Matthew E Levine; David J Albers; George Hripcsak
Journal:  AMIA Annu Symp Proc       Date:  2017-02-10

6.  Identifying and mitigating biases in EHR laboratory tests.

Authors:  Rimma Pivovarov; David J Albers; Jorge L Sepulveda; Noémie Elhadad
Journal:  J Biomed Inform       Date:  2014-04-13       Impact factor: 6.317

7.  Methodological variations in lagged regression for detecting physiologic drug effects in EHR data.

Authors:  Matthew E Levine; David J Albers; George Hripcsak
Journal:  J Biomed Inform       Date:  2018-08-30       Impact factor: 6.317

8.  Leveraging Clinical Expertise as a Feature - not an Outcome - of Predictive Models: Evaluation of an Early Warning System Use Case.

Authors:  Sarah Collins Rossetti; Chris Knaplund; Dave Albers; Abdul Tariq; Kui Tang; David Vawdrey; Natalie H Yip; Patricia C Dykes; Jeffrey G Klann; Min Jeoung Kang; Jose Garcia; Li-Heng Fu; Kumiko Schnock; Kenrick Cato
Journal:  AMIA Annu Symp Proc       Date:  2020-03-04

9.  Population physiology: leveraging electronic health record data to understand human endocrine dynamics.

Authors:  D J Albers; George Hripcsak; Michael Schmidt
Journal:  PLoS One       Date:  2012-12-14       Impact factor: 3.240

10.  Predictability Bounds of Electronic Health Records.

Authors:  Dominik Dahlem; Diego Maniloff; Carlo Ratti
Journal:  Sci Rep       Date:  2015-07-07       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.