Literature DB >> 22534127

NAP1 family histone chaperones are required for somatic homologous recombination in Arabidopsis.

Juan Gao1, Yan Zhu, Wangbin Zhou, Jean Molinier, Aiwu Dong, Wen-Hui Shen.   

Abstract

Homologous recombination (HR) is essential for maintaining genome integrity and variability. To orchestrate HR in the context of chromatin is a challenge, both in terms of DNA accessibility and restoration of chromatin organization after DNA repair. Histone chaperones function in nucleosome assembly/disassembly and could play a role in HR. Here, we show that the NUCLEOSOME ASSEMBLY PROTEIN1 (NAP1) family histone chaperones are required for somatic HR in Arabidopsis thaliana. Depletion of either the NAP1 group or NAP1-RELATED PROTEIN (NRP) group proteins caused a reduction in HR in plants under normal growth conditions as well as under a wide range of genotoxic or abiotic stresses. This contrasts with the hyperrecombinogenic phenotype caused by the depletion of the CHROMATIN ASSEMBLY FACTOR-1 (CAF-1) histone chaperone. Furthermore, we show that the hyperrecombinogenic phenotype caused by CAF-1 depletion relies on NRP1 and NRP2, but the telomere shortening phenotype does not. Our analysis of DNA lesions, H3K56 acetylation, and expression of DNA repair genes argues for a role of NAP1 family histone chaperones in nucleosome disassembly/reassembly during HR. Our study highlights distinct functions for different families of histone chaperones in the maintenance of genome stability and establishes a crucial function for NAP1 family histone chaperones in somatic HR.

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Year:  2012        PMID: 22534127      PMCID: PMC3407980          DOI: 10.1105/tpc.112.096792

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  40 in total

1.  Interchromatid and interhomolog recombination in Arabidopsis thaliana.

Authors:  Jean Molinier; Gerhard Ries; Sebastian Bonhoeffer; Barbara Hohn
Journal:  Plant Cell       Date:  2004-01-16       Impact factor: 11.277

2.  Molecular characterization of the tobacco SET domain protein NtSET1 unravels its role in histone methylation, chromatin binding, and segregation.

Authors:  Yu Yu; Aiwu Dong; Wen-Hui Shen
Journal:  Plant J       Date:  2004-12       Impact factor: 6.417

Review 3.  The dual nature of homologous recombination in plants.

Authors:  David Schuermann; Jean Molinier; Olivier Fritsch; Barbara Hohn
Journal:  Trends Genet       Date:  2005-03       Impact factor: 11.639

4.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

5.  Homologous recombination in planta is stimulated in the absence of Rad50.

Authors:  H Gherbi; M E Gallego; N Jalut; J M Lucht; B Hohn; C I White
Journal:  EMBO Rep       Date:  2001-04       Impact factor: 8.807

6.  The INO80 protein controls homologous recombination in Arabidopsis thaliana.

Authors:  Olivier Fritsch; Giovanna Benvenuto; Chris Bowler; Jean Molinier; Barbara Hohn
Journal:  Mol Cell       Date:  2004-11-05       Impact factor: 17.970

7.  Drosophila NAP-1 is a core histone chaperone that functions in ATP-facilitated assembly of regularly spaced nucleosomal arrays.

Authors:  T Ito; M Bulger; R Kobayashi; J T Kadonaga
Journal:  Mol Cell Biol       Date:  1996-06       Impact factor: 4.272

8.  Involvement of nucleocytoplasmic shuttling of yeast Nap1 in mitotic progression.

Authors:  Mary Miyaji-Yamaguchi; Kohsuke Kato; Ryosuke Nakano; Tomohiro Akashi; Akihiko Kikuchi; Kyosuke Nagata
Journal:  Mol Cell Biol       Date:  2003-09       Impact factor: 4.272

9.  GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants.

Authors:  R A Jefferson; T A Kavanagh; M W Bevan
Journal:  EMBO J       Date:  1987-12-20       Impact factor: 11.598

10.  Intrachromosomal homologous recombination in whole plants.

Authors:  P Swoboda; S Gal; B Hohn; H Puchta
Journal:  EMBO J       Date:  1994-01-15       Impact factor: 11.598

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  32 in total

1.  The Linker Histone GH1-HMGA1 Is Involved in Telomere Stability and DNA Damage Repair.

Authors:  Cyril Charbonnel; Oleh Rymarenko; Olivier Da Ines; Fatiha Benyahya; Charles I White; Falk Butter; Simon Amiard
Journal:  Plant Physiol       Date:  2018-04-05       Impact factor: 8.340

Review 2.  DNA Damage Repair in the Context of Plant Chromatin.

Authors:  Mattia Donà; Ortrun Mittelsten Scheid
Journal:  Plant Physiol       Date:  2015-06-18       Impact factor: 8.340

3.  Chaperones: needed for both the good times and the bad times.

Authors:  Roy A Quinlan; R John Ellis
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-03-25       Impact factor: 6.237

4.  Changes in homologous recombination frequency in Arabidopsis thaliana plants exposed to stress depend on time of exposure during development and on duration of stress exposure.

Authors:  Seyed Mohammad Reza Rahavi; Igor Kovalchuk
Journal:  Physiol Mol Biol Plants       Date:  2013-10

5.  Chromatin and epigenetics in all their states: Meeting report of the first conference on Epigenetic and Chromatin Regulation of Plant Traits - January 14 - 15, 2016 - Strasbourg, France.

Authors:  Till Bey; Suraj Jamge; Sonja Klemme; Dorota Natalia Komar; Sabine Le Gall; Pawel Mikulski; Martin Schmidt; Johan Zicola; Alexandre Berr
Journal:  Epigenetics       Date:  2016-05-16       Impact factor: 4.528

6.  The Histone Chaperone NRP1 Interacts with WEREWOLF to Activate GLABRA2 in Arabidopsis Root Hair Development.

Authors:  Yan Zhu; Liang Rong; Qiang Luo; Baihui Wang; Nana Zhou; Yue Yang; Chi Zhang; Haiyang Feng; Lina Zheng; Wen-Hui Shen; Jinbiao Ma; Aiwu Dong
Journal:  Plant Cell       Date:  2017-01-30       Impact factor: 11.277

7.  Deficiency of the Arabidopsis helicase RTEL1 triggers a SOG1-dependent replication checkpoint in response to DNA cross-links.

Authors:  Zhubing Hu; Toon Cools; Pooneh Kalhorzadeh; Jefri Heyman; Lieven De Veylder
Journal:  Plant Cell       Date:  2015-01-16       Impact factor: 11.277

8.  NAP1-Related Protein 1 (NRP1) has multiple interaction modes for chaperoning histones H2A-H2B.

Authors:  Qiang Luo; Baihui Wang; Zhen Wu; Wen Jiang; Yueyue Wang; Kangxi Du; Nana Zhou; Lina Zheng; Jianhua Gan; Wen-Hui Shen; Jinbiao Ma; Aiwu Dong
Journal:  Proc Natl Acad Sci U S A       Date:  2020-11-16       Impact factor: 11.205

9.  Arabidopsis Pol II-Dependent in Vitro Transcription System Reveals Role of Chromatin for Light-Inducible rbcS Gene Transcription.

Authors:  Ayaka Ido; Shinya Iwata; Yuka Iwata; Hisako Igarashi; Takahiro Hamada; Seiji Sonobe; Masahiro Sugiura; Yasushi Yukawa
Journal:  Plant Physiol       Date:  2015-12-10       Impact factor: 8.340

10.  The Arabidopsis SWR1 chromatin-remodeling complex is important for DNA repair, somatic recombination, and meiosis.

Authors:  Marisa Rosa; Mona Von Harder; Riccardo Aiese Cigliano; Peter Schlögelhofer; Ortrun Mittelsten Scheid
Journal:  Plant Cell       Date:  2013-06-18       Impact factor: 11.277

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