Literature DB >> 33199628

NAP1-Related Protein 1 (NRP1) has multiple interaction modes for chaperoning histones H2A-H2B.

Qiang Luo1, Baihui Wang1, Zhen Wu1, Wen Jiang1, Yueyue Wang2, Kangxi Du1, Nana Zhou1, Lina Zheng2, Jianhua Gan3, Wen-Hui Shen1,4, Jinbiao Ma5, Aiwu Dong6.   

Abstract

Nucleosome Assembly Protein 1 (NAP1) family proteins are evolutionarily conserved histone chaperones that play important roles in diverse biological processes. In this study, we determined the crystal structure of Arabidopsis NAP1-Related Protein 1 (NRP1) complexed with H2A-H2B and uncovered a previously unknown interaction mechanism in histone chaperoning. Both in vitro binding and in vivo plant rescue assays proved that interaction mediated by the N-terminal α-helix (αN) domain is essential for NRP1 function. In addition, the C-terminal acidic domain (CTAD) of NRP1 binds to H2A-H2B through a conserved mode similar to other histone chaperones. We further extended previous knowledge of the NAP1-conserved earmuff domain by mapping the amino acids of NRP1 involved in association with H2A-H2B. Finally, we showed that H2A-H2B interactions mediated by αN, earmuff, and CTAD domains are all required for the effective chaperone activity of NRP1. Collectively, our results reveal multiple interaction modes of a NAP1 family histone chaperone and shed light on how histone chaperones shield H2A-H2B from nonspecific interaction with DNA.
Copyright © 2020 the Author(s). Published by PNAS.

Entities:  

Keywords:  H2A-H2B; NAP1 family protein; crystal structure

Mesh:

Substances:

Year:  2020        PMID: 33199628      PMCID: PMC7720177          DOI: 10.1073/pnas.2011089117

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  41 in total

1.  Structure of Vps75 and implications for histone chaperone function.

Authors:  Yong Tang; Katrina Meeth; Eva Jiang; Cheng Luo; Ronen Marmorstein
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-22       Impact factor: 11.205

Review 2.  Histone chaperones: modulators of chromatin marks.

Authors:  Nikita Avvakumov; Amine Nourani; Jacques Côté
Journal:  Mol Cell       Date:  2011-03-04       Impact factor: 17.970

3.  Deficient in DNA methylation 1 (DDM1) defines a novel family of chromatin-remodeling factors.

Authors:  Jan Brzeski; Andrzej Jerzmanowski
Journal:  J Biol Chem       Date:  2002-10-25       Impact factor: 5.157

Review 4.  Histone H2A/H2B chaperones: from molecules to chromatin-based functions in plant growth and development.

Authors:  Wangbin Zhou; Yan Zhu; Aiwu Dong; Wen-Hui Shen
Journal:  Plant J       Date:  2015-04-08       Impact factor: 6.417

5.  Arabidopsis NAP1 Regulates the Formation of Autophagosomes.

Authors:  Pengwei Wang; Christine Richardson; Chris Hawes; Patrick J Hussey
Journal:  Curr Biol       Date:  2016-07-21       Impact factor: 10.834

6.  Molecular and reverse genetic characterization of NUCLEOSOME ASSEMBLY PROTEIN1 (NAP1) genes unravels their function in transcription and nucleotide excision repair in Arabidopsis thaliana.

Authors:  Ziqiang Liu; Yan Zhu; Juan Gao; Fang Yu; Aiwu Dong; Wen-Hui Shen
Journal:  Plant J       Date:  2009-02-18       Impact factor: 6.417

7.  Regulation of biosynthesis and intracellular localization of rice and tobacco homologues of nucleosome assembly protein 1.

Authors:  Aiwu Dong; Yan Zhu; Yu Yu; Kaiming Cao; Chongrong Sun; Wen-Hui Shen
Journal:  Planta       Date:  2002-10-10       Impact factor: 4.116

8.  Histone Chaperone Nap1 Is a Major Regulator of Histone H2A-H2B Dynamics at the Inducible GAL Locus.

Authors:  Xu Chen; Sheena D'Arcy; Catherine A Radebaugh; Daniel D Krzizike; Holli A Giebler; Liangquan Huang; Jennifer K Nyborg; Karolin Luger; Laurie A Stargell
Journal:  Mol Cell Biol       Date:  2016-03-31       Impact factor: 4.272

9.  FACT Disrupts Nucleosome Structure by Binding H2A-H2B with Conserved Peptide Motifs.

Authors:  David J Kemble; Laura L McCullough; Frank G Whitby; Tim Formosa; Christopher P Hill
Journal:  Mol Cell       Date:  2015-10-08       Impact factor: 17.970

10.  Structure of the RSC complex bound to the nucleosome.

Authors:  Youpi Ye; Hao Wu; Kangjing Chen; Cedric R Clapier; Naveen Verma; Wenhao Zhang; Haiteng Deng; Bradley R Cairns; Ning Gao; Zhucheng Chen
Journal:  Science       Date:  2019-10-31       Impact factor: 47.728

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  1 in total

Review 1.  Structural comparisons reveal diverse binding modes between nucleosome assembly proteins and histones.

Authors:  Jasmita Gill; Anuj Kumar; Amit Sharma
Journal:  Epigenetics Chromatin       Date:  2022-05-24       Impact factor: 5.465

  1 in total

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