Literature DB >> 23780875

The Arabidopsis SWR1 chromatin-remodeling complex is important for DNA repair, somatic recombination, and meiosis.

Marisa Rosa1, Mona Von Harder, Riccardo Aiese Cigliano, Peter Schlögelhofer, Ortrun Mittelsten Scheid.   

Abstract

All processes requiring interaction with DNA are attuned to occur within the context of the complex chromatin structure. As it does for programmed transcription and replication, this also holds true for unscheduled events, such as repair of DNA damage. Lesions such as double-strand breaks occur randomly; their repair requires that enzyme complexes access DNA at potentially any genomic site. This is achieved by chromatin remodeling factors that can locally slide, evict, or change nucleosomes. Here, we show that the Swi2/Snf2-related (SWR1 complex), known to deposit histone H2A.Z, is also important for DNA repair in Arabidopsis thaliana. Mutations in genes for Arabidopsis SWR1 complex subunits photoperiod-independent Early Flowering1, actin-related protein6, and SWR1 complex6 cause hypersensitivity to various DNA damaging agents. Even without additional genotoxic stress, these mutants show symptoms of DNA damage accumulation. The reduced DNA repair capacity is connected with impaired somatic homologous recombination, in contrast with the hyper-recombinogenic phenotype of yeast SWR1 mutants. This suggests functional diversification between lower and higher eukaryotes. Finally, reduced fertility and irregular gametogenesis in the Arabidopsis SWR1 mutants indicate an additional role for the chromatin-remodeling complex during meiosis. These results provide evidence for the importance of Arabidopsis SWR1 in somatic DNA repair and during meiosis.

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Year:  2013        PMID: 23780875      PMCID: PMC3723608          DOI: 10.1105/tpc.112.104067

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  68 in total

Review 1.  NuA4 and SWR1-C: two chromatin-modifying complexes with overlapping functions and components.

Authors:  Phoebe Y T Lu; Nancy Lévesque; Michael S Kobor
Journal:  Biochem Cell Biol       Date:  2009-10       Impact factor: 3.626

2.  The INO80 protein controls homologous recombination in Arabidopsis thaliana.

Authors:  Olivier Fritsch; Giovanna Benvenuto; Chris Bowler; Jean Molinier; Barbara Hohn
Journal:  Mol Cell       Date:  2004-11-05       Impact factor: 17.970

3.  DNA replication factor C1 mediates genomic stability and transcriptional gene silencing in Arabidopsis.

Authors:  Qian Liu; Junguo Wang; Daisuke Miki; Ran Xia; Wenxiang Yu; Junna He; Zhimin Zheng; Jian-Kang Zhu; Zhizhong Gong
Journal:  Plant Cell       Date:  2010-07-16       Impact factor: 11.277

4.  Histone H2A.Z and homologues of components of the SWR1 complex are required to control immunity in Arabidopsis.

Authors:  Rosana March-Díaz; Mario García-Domínguez; Jorge Lozano-Juste; José León; Francisco J Florencio; José C Reyes
Journal:  Plant J       Date:  2007-11-06       Impact factor: 6.417

5.  The Arabidopsis AtRAD51 gene is dispensable for vegetative development but required for meiosis.

Authors:  Wuxing Li; Changbin Chen; Ullrich Markmann-Mulisch; Ljudmilla Timofejeva; Elmon Schmelzer; Hong Ma; Bernd Reiss
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-12       Impact factor: 11.205

6.  Mutation in the catalytic subunit of DNA polymerase alpha influences transcriptional gene silencing and homologous recombination in Arabidopsis.

Authors:  Jun Liu; Xiaozhi Ren; Haibo Yin; Yu Wang; Ran Xia; Youqun Wang; Zhizhong Gong
Journal:  Plant J       Date:  2009-09-21       Impact factor: 6.417

7.  Asy1, a protein required for meiotic chromosome synapsis, localizes to axis-associated chromatin in Arabidopsis and Brassica.

Authors:  Susan J Armstrong; Anthony P Caryl; Gareth H Jones; F Christopher H Franklin
Journal:  J Cell Sci       Date:  2002-09-15       Impact factor: 5.285

Review 8.  Genotoxic stress in plants: shedding light on DNA damage, repair and DNA repair helicases.

Authors:  Narendra Tuteja; Parvaiz Ahmad; Brahma B Panda; Renu Tuteja
Journal:  Mutat Res       Date:  2008-07-03       Impact factor: 2.433

9.  Lethality induced by a single site-specific double-strand break in a dispensable yeast plasmid.

Authors:  C B Bennett; A L Lewis; K K Baldwin; M A Resnick
Journal:  Proc Natl Acad Sci U S A       Date:  1993-06-15       Impact factor: 11.205

10.  Transgenerational stress memory is not a general response in Arabidopsis.

Authors:  Ales Pecinka; Marisa Rosa; Adam Schikora; Marc Berlinger; Heribert Hirt; Christian Luschnig; Ortrun Mittelsten Scheid
Journal:  PLoS One       Date:  2009-04-21       Impact factor: 3.240

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  46 in total

1.  The histone variant H2A.Z and chromatin remodeler BRAHMA act coordinately and antagonistically to regulate transcription and nucleosome dynamics in Arabidopsis.

Authors:  E Shannon Torres; Roger B Deal
Journal:  Plant J       Date:  2019-03-19       Impact factor: 6.417

Review 2.  DNA Damage Repair in the Context of Plant Chromatin.

Authors:  Mattia Donà; Ortrun Mittelsten Scheid
Journal:  Plant Physiol       Date:  2015-06-18       Impact factor: 8.340

3.  The Mitochondrial DNA-Associated Protein SWIB5 Influences mtDNA Architecture and Homologous Recombination.

Authors:  Jonas Blomme; Olivier Van Aken; Jelle Van Leene; Teddy Jégu; Riet De Rycke; Michiel De Bruyne; Jasmien Vercruysse; Jonah Nolf; Twiggy Van Daele; Liesbeth De Milde; Mattias Vermeersch; Catherine Colas des Francs-Small; Geert De Jaeger; Moussa Benhamed; A Harvey Millar; Dirk Inzé; Nathalie Gonzalez
Journal:  Plant Cell       Date:  2017-04-18       Impact factor: 11.277

4.  Plant chromatin warms up in Madrid: meeting summary of the 3rd European Workshop on Plant Chromatin 2013, Madrid, Spain.

Authors:  José A Jarillo; Valérie Gaudin; Lars Hennig; Claudia Köhler; Manuel Piñeiro
Journal:  Epigenetics       Date:  2014-02-06       Impact factor: 4.528

5.  H2A.Z promotes the transcription of MIR156A and MIR156C in Arabidopsis by facilitating the deposition of H3K4me3.

Authors:  Mingli Xu; Aaron R Leichty; Tieqiang Hu; R Scott Poethig
Journal:  Development       Date:  2018-01-25       Impact factor: 6.868

Review 6.  The conserved histone variant H2A.Z illuminates meiotic recombination initiation.

Authors:  Shintaro Yamada; Kazuto Kugou; Da-Qiao Ding; Yurika Fujita; Yasushi Hiraoka; Hiroshi Murakami; Kunihiro Ohta; Takatomi Yamada
Journal:  Curr Genet       Date:  2018-03-16       Impact factor: 3.886

7.  The Evening Complex Establishes Repressive Chromatin Domains Via H2A.Z Deposition.

Authors:  Meixuezi Tong; Kyounghee Lee; Daphne Ezer; Sandra Cortijo; Jaehoon Jung; Varodom Charoensawan; Mathew S Box; Katja E Jaeger; Nozomu Takahashi; Paloma Mas; Philip A Wigge; Pil Joon Seo
Journal:  Plant Physiol       Date:  2019-11-11       Impact factor: 8.340

8.  A plant-specific SWR1 chromatin-remodeling complex couples histone H2A.Z deposition with nucleosome sliding.

Authors:  Yu-Xi Luo; Xiao-Mei Hou; Cui-Jun Zhang; Lian-Mei Tan; Chang-Rong Shao; Rong-Nan Lin; Yin-Na Su; Xue-Wei Cai; Lin Li; She Chen; Xin-Jian He
Journal:  EMBO J       Date:  2020-03-02       Impact factor: 11.598

9.  The Chromatin Remodelers PKL and PIE1 Act in an Epigenetic Pathway That Determines H3K27me3 Homeostasis in Arabidopsis.

Authors:  Benjamin Carter; Brett Bishop; Kwok Ki Ho; Ru Huang; Wei Jia; Heng Zhang; Pete E Pascuzzi; Roger B Deal; Joe Ogas
Journal:  Plant Cell       Date:  2018-05-25       Impact factor: 11.277

10.  Whole-mount immunolocalization to study female meiosis in Arabidopsis.

Authors:  Rocio Escobar-Guzmán; Daniel Rodríguez-Leal; Jean-Philippe Vielle-Calzada; Arnaud Ronceret
Journal:  Nat Protoc       Date:  2015-09-10       Impact factor: 13.491

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