Literature DB >> 22528493

Uncovering biphasic catalytic mode of C5-epimerase in heparan sulfate biosynthesis.

Juzheng Sheng1, Yongmei Xu, Steven B Dulaney, Xuefei Huang, Jian Liu.   

Abstract

Heparan sulfate (HS), a highly sulfated polysaccharide, is biosynthesized through a pathway involving several enzymes. C(5)-epimerase (C(5)-epi) is a key enzyme in this pathway. C(5)-epi is known for being a two-way catalytic enzyme, displaying a "reversible" catalytic mode by converting a glucuronic acid to an iduronic acid residue, and vice versa. Here, we discovered that C(5)-epi can also serve as a one-way catalyst to convert a glucuronic acid to an iduronic acid residue, displaying an "irreversible" catalytic mode. Our data indicated that the reversible or irreversible catalytic mode strictly depends on the saccharide substrate structures. The biphasic mode of C(5)-epi offers a novel mechanism to regulate the biosynthesis of HS with the desired biological functions.

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Year:  2012        PMID: 22528493      PMCID: PMC3375523          DOI: 10.1074/jbc.M112.359885

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  24 in total

Review 1.  Order out of chaos: assembly of ligand binding sites in heparan sulfate.

Authors:  Jeffrey D Esko; Scott B Selleck
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

2.  Directing the biological activities of heparan sulfate oligosaccharides using a chemoenzymatic approach.

Authors:  Yongmei Xu; Zhen Wang; Renpeng Liu; Arlene S Bridges; Xuefei Huang; Jian Liu
Journal:  Glycobiology       Date:  2011-08-11       Impact factor: 4.313

3.  Expression of heparan sulfate sulfotransferases in Kluyveromyces lactis and preparation of 3'-phosphoadenosine-5'-phosphosulfate.

Authors:  Xianxuan Zhou; Kasemsiri Chandarajoti; Truong Quang Pham; Renpeng Liu; Jian Liu
Journal:  Glycobiology       Date:  2011-01-11       Impact factor: 4.313

4.  Preactivation-based, one-pot combinatorial synthesis of heparin-like hexasaccharides for the analysis of heparin-protein interactions.

Authors:  Zhen Wang; Yongmei Xu; Bo Yang; Gopinath Tiruchinapally; Bin Sun; Renpeng Liu; Steven Dulaney; Jian Liu; Xuefei Huang
Journal:  Chemistry       Date:  2010-07-26       Impact factor: 5.236

5.  Biosynthesis of heparin/heparan sulfate: kinetic studies of the glucuronyl C5-epimerase with N-sulfated derivatives of the Escherichia coli K5 capsular polysaccharide as substrates.

Authors:  A Hagner-McWhirter; H H Hannesson; P Campbell; J Westley; L Rodén; U Lindahl; J P Li
Journal:  Glycobiology       Date:  2000-02       Impact factor: 4.313

6.  Hydrogen/deuterium exchange-LC-MS approach to characterize the action of heparan sulfate C5-epimerase.

Authors:  Ponnusamy Babu; Xylophone V Victor; Emily Nelsen; Thao Kim Nu Nguyen; Karthik Raman; Balagurunathan Kuberan
Journal:  Anal Bioanal Chem       Date:  2011-05-15       Impact factor: 4.142

7.  Chemoenzymatic synthesis of homogeneous ultralow molecular weight heparins.

Authors:  Yongmei Xu; Sayaka Masuko; Majde Takieddin; Haoming Xu; Renpeng Liu; Juliana Jing; Shaker A Mousa; Robert J Linhardt; Jian Liu
Journal:  Science       Date:  2011-10-28       Impact factor: 47.728

8.  Using engineered 2-O-sulfotransferase to determine the activity of heparan sulfate C5-epimerase and its mutants.

Authors:  Kai Li; Heather N Bethea; Jian Liu
Journal:  J Biol Chem       Date:  2010-01-29       Impact factor: 5.157

9.  The dominating role of N-deacetylase/N-sulfotransferase 1 in forming domain structures in heparan sulfate.

Authors:  Juzheng Sheng; Renpeng Liu; Yongmei Xu; Jian Liu
Journal:  J Biol Chem       Date:  2011-03-28       Impact factor: 5.157

10.  Synthesis of conformationally locked L-iduronic acid derivatives: direct evidence for a critical role of the skew-boat 2S0 conformer in the activation of antithrombin by heparin.

Authors:  S K Das; J M Mallet; J Esnault; P A Driguez; P Duchaussoy; P Sizun; J P Herault; J M Herbert; M Petitou; P Sinaÿ
Journal:  Chemistry       Date:  2001-11-19       Impact factor: 5.236

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  29 in total

1.  Chemoenzymatic synthesis of heparin oligosaccharides with both anti-factor Xa and anti-factor IIa activities.

Authors:  Yongmei Xu; Elizabeth H Pempe; Jian Liu
Journal:  J Biol Chem       Date:  2012-07-06       Impact factor: 5.157

2.  Controlled Chemoenzymatic Synthesis of Heparan Sulfate Oligosaccharides.

Authors:  Weigang Lu; Chengli Zong; Pradeep Chopra; Lauren E Pepi; Yongmei Xu; I Jonathan Amster; Jian Liu; Geert-Jan Boons
Journal:  Angew Chem Int Ed Engl       Date:  2018-03-30       Impact factor: 15.336

3.  Fibroblast growth factor-based signaling through synthetic heparan sulfate blocks copolymers studied using high cell density three-dimensional cell printing.

Authors:  Eric Sterner; Sayaka Masuko; Guoyun Li; Lingyun Li; Dixy E Green; Nigel J Otto; Yongmei Xu; Paul L DeAngelis; Jian Liu; Jonathan S Dordick; Robert J Linhardt
Journal:  J Biol Chem       Date:  2014-02-22       Impact factor: 5.157

4.  Homogeneous low-molecular-weight heparins with reversible anticoagulant activity.

Authors:  Yongmei Xu; Chao Cai; Kasemsiri Chandarajoti; Po-Hung Hsieh; Lingyun Li; Truong Q Pham; Erica M Sparkenbaugh; Juzheng Sheng; Nigel S Key; Rafal Pawlinski; Edward N Harris; Robert J Linhardt; Jian Liu
Journal:  Nat Chem Biol       Date:  2014-02-23       Impact factor: 15.040

5.  Combinatorial one-pot chemoenzymatic synthesis of heparin.

Authors:  Ujjwal Bhaskar; Guoyun Li; Li Fu; Akihiro Onishi; Mathew Suflita; Jonathan S Dordick; Robert J Linhardt
Journal:  Carbohydr Polym       Date:  2014-11-07       Impact factor: 9.381

6.  Structural and functional study of D-glucuronyl C5-epimerase.

Authors:  Yi Qin; Jiyuan Ke; Xin Gu; Jianping Fang; Wucheng Wang; Qifei Cong; Jie Li; Jinzhi Tan; Joseph S Brunzelle; Chenghai Zhang; Yi Jiang; Karsten Melcher; Jin-ping Li; H Eric Xu; Kan Ding
Journal:  J Biol Chem       Date:  2015-01-07       Impact factor: 5.157

7.  Molecular mechanism of substrate specificity for heparan sulfate 2-O-sulfotransferase.

Authors:  Chunhui Liu; Juzheng Sheng; Juno M Krahn; Lalith Perera; Yongmei Xu; Po-Hung Hsieh; Wenfang Dou; Jian Liu; Lars C Pedersen
Journal:  J Biol Chem       Date:  2014-03-20       Impact factor: 5.157

Review 8.  Chemoenzymatic synthesis of glycosaminoglycans: re-creating, re-modeling and re-designing nature's longest or most complex carbohydrate chains.

Authors:  Paul L DeAngelis; Jian Liu; Robert J Linhardt
Journal:  Glycobiology       Date:  2013-03-11       Impact factor: 4.313

9.  Uncovering the Catalytic Direction of Chondroitin AC Exolyase: FROM THE REDUCING END TOWARDS THE NON-REDUCING END.

Authors:  Feng-Xin Yin; Feng-Shan Wang; Ju-Zheng Sheng
Journal:  J Biol Chem       Date:  2016-01-07       Impact factor: 5.157

Review 10.  Heparin and related polysaccharides: synthesis using recombinant enzymes and metabolic engineering.

Authors:  Matthew Suflita; Li Fu; Wenqin He; Mattheos Koffas; Robert J Linhardt
Journal:  Appl Microbiol Biotechnol       Date:  2015-07-29       Impact factor: 4.813

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