Literature DB >> 22527047

Life at the hyperarid margin: novel bacterial diversity in arid soils of the Atacama Desert, Chile.

Julia W Neilson1, Jay Quade, Marianyoly Ortiz, William M Nelson, Antje Legatzki, Fei Tian, Michelle LaComb, Julio L Betancourt, Rod A Wing, Carol A Soderlund, Raina M Maier.   

Abstract

Nearly half the earth's surface is occupied by dryland ecosystems, regions susceptible to reduced states of biological productivity caused by climate fluctuations. Of these regions, arid zones located at the interface between vegetated semiarid regions and biologically unproductive hyperarid zones are considered most vulnerable. The objective of this study was to conduct a deep diversity analysis of bacterial communities in unvegetated arid soils of the Atacama Desert, to characterize community structure and infer the functional potential of these communities based on observed phylogenetic associations. A 454-pyrotag analysis was conducted of three unvegetated arid sites located at the hyperarid-arid margin. The analysis revealed communities with unique bacterial diversity marked by high abundances of novel Actinobacteria and Chloroflexi and low levels of Acidobacteria and Proteobacteria, phyla that are dominant in many biomes. A 16S rRNA gene library of one site revealed the presence of clones with phylogenetic associations to chemoautotrophic taxa able to obtain energy through oxidation of nitrite, carbon monoxide, iron, or sulfur. Thus, soils at the hyperarid margin were found to harbor a wealth of novel bacteria and to support potentially viable communities with phylogenetic associations to non-phototrophic primary producers and bacteria capable of biogeochemical cycling.

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Year:  2012        PMID: 22527047     DOI: 10.1007/s00792-012-0454-z

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  38 in total

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Authors: 
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Journal:  J Dent Res       Date:  2008-11       Impact factor: 6.116

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Authors:  Sebastian Lücker; Michael Wagner; Frank Maixner; Eric Pelletier; Hanna Koch; Benoit Vacherie; Thomas Rattei; Jaap S Sinninghe Damsté; Eva Spieck; Denis Le Paslier; Holger Daims
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Journal:  FEMS Microbiol Ecol       Date:  2010-09-24       Impact factor: 4.194

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  49 in total

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Journal:  Microb Ecol       Date:  2018-01-05       Impact factor: 4.552

5.  Namib Desert Soil Microbial Community Diversity, Assembly, and Function Along a Natural Xeric Gradient.

Authors:  Vincent Scola; Jean-Baptiste Ramond; Aline Frossard; Olivier Zablocki; Evelien M Adriaenssens; Riegardt M Johnson; Mary Seely; Don A Cowan
Journal:  Microb Ecol       Date:  2017-06-24       Impact factor: 4.552

6.  Soil microbial responses to increased moisture and organic resources along a salinity gradient in a polar desert.

Authors:  David J Van Horn; Jordan G Okie; Heather N Buelow; Michael N Gooseff; John E Barrett; Cristina D Takacs-Vesbach
Journal:  Appl Environ Microbiol       Date:  2014-03-07       Impact factor: 4.792

7.  Characterization of bacterial diversity associated with microbial mats, gypsum evaporites and carbonate microbialites in thalassic wetlands: Tebenquiche and La Brava, Salar de Atacama, Chile.

Authors:  M E Farías; M Contreras; M C Rasuk; D Kurth; M R Flores; D G Poiré; F Novoa; P T Visscher
Journal:  Extremophiles       Date:  2014-01-18       Impact factor: 2.395

8.  Rhizobacterial Community Structures Associated with Native Plants Grown in Chilean Extreme Environments.

Authors:  Milko A Jorquera; Fumito Maruyama; Andrew V Ogram; Oscar U Navarrete; Lorena M Lagos; Nitza G Inostroza; Jacquelinne J Acuña; Joaquín I Rilling; María de La Luz Mora
Journal:  Microb Ecol       Date:  2016-07-13       Impact factor: 4.552

9.  Microbiome analysis and bacterial isolation from Lejía Lake soil in Atacama Desert.

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Journal:  Extremophiles       Date:  2018-04-23       Impact factor: 2.395

10.  Habitat-specific type I polyketide synthases in soils and street sediments.

Authors:  Patrick Hill; Jörn Piel; Stéphane Aris-Brosou; Václav Krištůfek; Christopher N Boddy; Lubbert Dijkhuizen
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