Literature DB >> 20659147

Distribution and diversity of carbon monoxide-oxidizing bacteria and bulk bacterial communities across a succession gradient on a Hawaiian volcanic deposit.

C F Weber1, G M King.   

Abstract

Relatively little is known about the distribution and diversity of CO-oxidizing bacteria during succession on volcanic deposits even though they are among the primary colonists. We surveyed CO-oxidizing communities across a vegetation gradient on a 1959 cinder deposit using coxL (large subunit gene of carbon monoxide dehydrogenase) sequences. Sequences most closely related to a coxL sequence from Ktedonobacter racemifer, dominated unvegetated cinders, while Proteobacteria-like sequences dominated vegetated sites. The number of coxL operational taxonomic units (OTUs) increased threefold with increased vegetation, and correlated most strongly with the increased beta-Proteobacteria richness (r = 0.987). These compositional shifts were also reflected in overall bacterial community compositions as determined by 16S rRNA gene analysis. Notably, coxL OTU:16S rRNA OTU ratios increased with increased vegetation, indicating that CO oxidizers became a larger fraction of total bacterial richness during succession. Results from most probable number estimates and maximum potential CO uptake activity assays indicate that increased richness is paralleled by increased CO oxidizer abundance, which likely results from increased vegetation and organic carbon content. Collectively, results suggest that in contrast to patterns observed for plant succession, a versatile bacterial functional group that is important during early colonization and succession can remain important in later stages of succession, irrespective of dramatic environmental changes.

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Year:  2010        PMID: 20659147     DOI: 10.1111/j.1462-2920.2010.02190.x

Source DB:  PubMed          Journal:  Environ Microbiol        ISSN: 1462-2912            Impact factor:   5.491


  25 in total

1.  Life at the hyperarid margin: novel bacterial diversity in arid soils of the Atacama Desert, Chile.

Authors:  Julia W Neilson; Jay Quade; Marianyoly Ortiz; William M Nelson; Antje Legatzki; Fei Tian; Michelle LaComb; Julio L Betancourt; Rod A Wing; Carol A Soderlund; Raina M Maier
Journal:  Extremophiles       Date:  2012-04-18       Impact factor: 2.395

2.  Identification of Unknown Carboxydovore Bacteria Dominant in Deciduous Forest Soil via Succession of Bacterial Communities, coxL Genotypes, and Carbon Monoxide Oxidation Activity in Soil Microcosms.

Authors:  Isabelle Lalonde; Philippe Constant
Journal:  Appl Environ Microbiol       Date:  2015-12-18       Impact factor: 4.792

3.  Quantification of burkholderia coxL genes in Hawaiian volcanic deposits.

Authors:  C F Weber; G M King
Journal:  Appl Environ Microbiol       Date:  2010-02-05       Impact factor: 4.792

4.  Genome data mining and soil survey for the novel group 5 [NiFe]-hydrogenase to explore the diversity and ecological importance of presumptive high-affinity H(2)-oxidizing bacteria.

Authors:  Philippe Constant; Soumitra Paul Chowdhury; Laura Hesse; Jennifer Pratscher; Ralf Conrad
Journal:  Appl Environ Microbiol       Date:  2011-07-08       Impact factor: 4.792

5.  Pioneer microbial communities of the Fimmvörðuháls lava flow, Eyjafjallajökull, Iceland.

Authors:  Laura C Kelly; Charles S Cockell; Thorsteinn Thorsteinsson; Viggó Marteinsson; John Stevenson
Journal:  Microb Ecol       Date:  2014-05-27       Impact factor: 4.552

6.  Temperature responses of carbon monoxide and hydrogen uptake by vegetated and unvegetated volcanic cinders.

Authors:  Caitlin E King; Gary M King
Journal:  ISME J       Date:  2012-01-19       Impact factor: 10.302

7.  Bacterial diversity of terrestrial crystalline volcanic rocks, Iceland.

Authors:  Laura C Kelly; Charles S Cockell; Aude Herrera-Belaroussi; Yvette Piceno; Gary Andersen; Todd DeSantis; Eoin Brodie; Thorsteinn Thorsteinsson; Viggó Marteinsson; Franck Poly; Xavier LeRoux
Journal:  Microb Ecol       Date:  2011-05-17       Impact factor: 4.552

8.  Metagenomic analysis for the microbial consortium of anaerobic CO oxidizers.

Authors:  Ying Guo; Jingliang Xu; Zhenhong Yuan; Xiekun Li; Weizheng Zhou; Huijuan Xu; Cuiyi Liang; Yu Zhang; Xinshu Zhuang
Journal:  Microb Biotechnol       Date:  2015-04-15       Impact factor: 5.813

9.  Co-occurrence patterns of plants and soil bacteria in the high-alpine subnival zone track environmental harshness.

Authors:  Andrew J King; Emily C Farrer; Katharine N Suding; Steven K Schmidt
Journal:  Front Microbiol       Date:  2012-10-11       Impact factor: 5.640

10.  Land-use influences the distribution and activity of high affinity CO-oxidizing bacteria associated to type I-coxL genotype in soil.

Authors:  Liliana Quiza; Isabelle Lalonde; Claude Guertin; Philippe Constant
Journal:  Front Microbiol       Date:  2014-06-12       Impact factor: 5.640

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