Literature DB >> 22525748

X-ray-excited optical luminescence of protein crystals: a new tool for studying radiation damage during diffraction data collection.

Robin L Owen1, Briony A Yorke, Arwen R Pearson.   

Abstract

During X-ray irradiation protein crystals radiate energy in the form of small amounts of visible light. This is known as X-ray-excited optical luminescence (XEOL). The XEOL of several proteins and their constituent amino acids has been characterized using the microspectrophotometers at the Swiss Light Source and Diamond Light Source. XEOL arises primarily from aromatic amino acids, but the effects of local environment and quenching within a crystal mean that the XEOL spectrum of a crystal is not the simple sum of the spectra of its constituent parts. Upon repeated exposure to X-rays XEOL spectra decay non-uniformly, suggesting that XEOL is sensitive to site-specific radiation damage. However, rates of XEOL decay were found not to correlate to decays in diffracting power, making XEOL of limited use as a metric for radiation damage to protein crystals.
© 2012 International Union of Crystallography

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22525748      PMCID: PMC3370260          DOI: 10.1107/S0907444912002946

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  16 in total

Review 1.  Combining X-ray crystallography and single-crystal spectroscopy to probe enzyme mechanisms.

Authors:  Arwen R Pearson; Robin L Owen
Journal:  Biochem Soc Trans       Date:  2009-04       Impact factor: 5.407

2.  Structural basis of X-ray-induced transient photobleaching in a photoactivatable green fluorescent protein.

Authors:  Virgile Adam; Philippe Carpentier; Sebastien Violot; Mickaël Lelimousin; Claudine Darnault; G Ulrich Nienhaus; Dominique Bourgeois
Journal:  J Am Chem Soc       Date:  2009-12-23       Impact factor: 15.419

Review 3.  Infrared protein crystallography.

Authors:  J Timothy Sage; Yunbin Zhang; John McGeehan; Raimond B G Ravelli; Martin Weik; Jasper J van Thor
Journal:  Biochim Biophys Acta       Date:  2011-03-02

4.  On the x-ray-induced thermoluminescence of some proteins in the dry state and in solution.

Authors:  D Nummedal; H B Steen
Journal:  Radiat Res       Date:  1969-08       Impact factor: 2.841

5.  Effect of temperature on x-ray--induced light emission from powders of amino acids and trypsin.

Authors:  J G Carter; D R Nelson; L G Augenstein
Journal:  Arch Biochem Biophys       Date:  1965-08       Impact factor: 4.013

6.  On the luminescence of L-tryptophane and L-tyrosine in aqueous solution at 77 degrees K induced by x-rays and U.V.-light.

Authors:  H B Steen
Journal:  Photochem Photobiol       Date:  1967-11       Impact factor: 3.421

7.  Small angle X-ray scattering as a complementary tool for high-throughput structural studies.

Authors:  Thomas D Grant; Joseph R Luft; Jennifer R Wolfley; Hiro Tsuruta; Anne Martel; Gaetano T Montelione; Edward H Snell
Journal:  Biopolymers       Date:  2011-04-01       Impact factor: 2.505

8.  Radiation damage in macromolecular crystallography: what is it and why should we care?

Authors:  Elspeth F Garman
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

9.  The linear energy transfer dependence of excited singlet-state lifetimes of hydrocarbon liquids exposed to X rays.

Authors:  R A Holroyd; J M Preses; J C Hanson
Journal:  Radiat Res       Date:  1993-09       Impact factor: 2.841

10.  Structure of an Escherichia coli N-acetyl-D-neuraminic acid lyase mutant, E192N, in complex with pyruvate at 1.45 angstrom resolution.

Authors:  Ivan Campeotto; Stephen B Carr; Chi H Trinh; Adam S Nelson; Alan Berry; Simon E V Phillips; Arwen R Pearson
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-10-24
View more
  6 in total

1.  Global radiation damage: temperature dependence, time dependence and how to outrun it.

Authors:  Matthew Warkentin; Jesse B Hopkins; Ryan Badeau; Anne M Mulichak; Lisa J Keefe; Robert E Thorne
Journal:  J Synchrotron Radiat       Date:  2012-11-29       Impact factor: 2.616

Review 2.  From protein structure to function via single crystal optical spectroscopy.

Authors:  Luca Ronda; Stefano Bruno; Stefano Bettati; Paola Storici; Andrea Mozzarelli
Journal:  Front Mol Biosci       Date:  2015-04-28

3.  A new on-axis micro-spectrophotometer for combining Raman, fluorescence and UV/Vis absorption spectroscopy with macromolecular crystallography at the Swiss Light Source.

Authors:  Guillaume Pompidor; Florian S N Dworkowski; Vincent Thominet; Clemens Schulze-Briese; Martin R Fuchs
Journal:  J Synchrotron Radiat       Date:  2013-07-05       Impact factor: 2.616

4.  In crystallo optical spectroscopy (icOS) as a complementary tool on the macromolecular crystallography beamlines of the ESRF.

Authors:  David von Stetten; Thierry Giraud; Philippe Carpentier; Franc Sever; Maxime Terrien; Fabien Dobias; Douglas H Juers; David Flot; Christoph Mueller-Dieckmann; Gordon A Leonard; Daniele de Sanctis; Antoine Royant
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-01-01

5.  Radiation-damage-induced phasing: a case study using UV irradiation with light-emitting diodes.

Authors:  Daniele de Sanctis; Chloe Zubieta; Franck Felisaz; Hugo Caserotto; Max H Nanao
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-03-01       Impact factor: 7.652

6.  Real time observation of X-ray-induced surface modification using simultaneous XANES and XEOL-XANES.

Authors:  Annemie Adriaens; Paul Quinn; Sergey Nikitenko; Mark G Dowsett
Journal:  Anal Chem       Date:  2013-09-30       Impact factor: 6.986

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.