Literature DB >> 22505141

Intrinsically disordered proteins: from sequence and conformational properties toward drug discovery.

Nasrollah Rezaei-Ghaleh1, Martin Blackledge, Markus Zweckstetter.   

Abstract

Structural disorder of functional proteins under physiological conditions is widespread within eukaryotic proteomes. The lack of stable tertiary and secondary structure offers a variety of functional advantages to intrinsically disordered proteins (IDPs): their malleability of interaction with different partners, specific but low-affinity binding, and their fine modulation by post-translational modifications. IDPs are therefore central players in key processes such as cell-cycle control and signal-transduction pathways, and impairment of their function is associated with many disease states such as cancer and neurodegenerative disorders. Fascinating progress in the experimental characterization of IDPs has been made in the last decade, especially in NMR spectroscopy and small-angle X-ray scattering as well as in single-molecule techniques. It has been accompanied by the development of powerful computational tools to translate experimental results in explicit ensemble representations of IDPs. With the aid of bioinformatics tools, these advances have paved the way to targeting IDP interactions in rational drug-discovery projects.
Copyright © 2012 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2012        PMID: 22505141     DOI: 10.1002/cbic.201200093

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  32 in total

1.  Improved validation of IDP ensembles by one-bond Cα-Hα scalar couplings.

Authors:  Vytautas Gapsys; Raghavendran L Narayanan; ShengQi Xiang; Bert L de Groot; Markus Zweckstetter
Journal:  J Biomol NMR       Date:  2015-10-03       Impact factor: 2.835

2.  HN-NCA heteronuclear TOCSY-NH experiment for (1)H(N) and (15)N sequential correlations in ((13)C, (15)N) labelled intrinsically disordered proteins.

Authors:  Christoph Wiedemann; Nishit Goradia; Sabine Häfner; Christian Herbst; Matthias Görlach; Oliver Ohlenschläger; Ramadurai Ramachandran
Journal:  J Biomol NMR       Date:  2015-08-18       Impact factor: 2.835

3.  HN(CA)N and HN(COCA)N experiments for assignment of large disordered proteins.

Authors:  Xiao Liu; Daiwen Yang
Journal:  J Biomol NMR       Date:  2013-09-20       Impact factor: 2.835

4.  From sequence and forces to structure, function, and evolution of intrinsically disordered proteins.

Authors:  Julie D Forman-Kay; Tanja Mittag
Journal:  Structure       Date:  2013-09-03       Impact factor: 5.006

5.  A six-dimensional alpha proton detection-based APSY experiment for backbone assignment of intrinsically disordered proteins.

Authors:  Xuejun Yao; Stefan Becker; Markus Zweckstetter
Journal:  J Biomol NMR       Date:  2014-11-04       Impact factor: 2.835

6.  Fast association and slow transitions in the interaction between two intrinsically disordered protein domains.

Authors:  Jakob Dogan; Tanja Schmidt; Xin Mu; Åke Engström; Per Jemth
Journal:  J Biol Chem       Date:  2012-08-22       Impact factor: 5.157

7.  Association between foldability and aggregation propensity in small disulfide-rich proteins.

Authors:  Hugo Fraga; Ricardo Graña-Montes; Ricard Illa; Giovanni Covaleda; Salvador Ventura
Journal:  Antioxid Redox Signal       Date:  2014-05-05       Impact factor: 8.401

8.  Multiple interactions of the intrinsically disordered region between the helicase and nuclease domains of the archaeal Hef protein.

Authors:  Sonoko Ishino; Takeshi Yamagami; Makoto Kitamura; Noriyuki Kodera; Tetsuya Mori; Shyogo Sugiyama; Toshio Ando; Natsuko Goda; Takeshi Tenno; Hidekazu Hiroaki; Yoshizumi Ishino
Journal:  J Biol Chem       Date:  2014-06-19       Impact factor: 5.157

Review 9.  Pathological unfoldomics of uncontrolled chaos: intrinsically disordered proteins and human diseases.

Authors:  Vladimir N Uversky; Vrushank Davé; Lilia M Iakoucheva; Prerna Malaney; Steven J Metallo; Ravi Ramesh Pathak; Andreas C Joerger
Journal:  Chem Rev       Date:  2014-05-15       Impact factor: 60.622

10.  The TFE-induced transient native-like structure of the intrinsically disordered σ₄⁷⁰ domain of Escherichia coli RNA polymerase.

Authors:  Piotr Kaczka; Maria Winiewska; Igor Zhukov; Bożenna Rempoła; Krystyna Bolewska; Tomasz Łoziński; Andrzej Ejchart; Anna Poznańska; Kazimierz L Wierzchowski; Jarosław Poznański
Journal:  Eur Biophys J       Date:  2014-09-27       Impact factor: 1.733

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