Literature DB >> 22495435

Harnessing genomics and genome biology to understand malaria biology.

Sarah K Volkman1, Daniel E Neafsey, Stephen F Schaffner, Daniel J Park, Dyann F Wirth.   

Abstract

Malaria is an important human disease and is the target of a global eradication campaign. New technological and informatics advancements in population genomics are being leveraged to identify genetic loci under selection in the malaria parasite and to find variants that are associated with key clinical phenotypes, such as drug resistance. This article provides a timely Review of how population-genetics-based strategies are being applied to Plasmodium falciparum both to identify genetic loci as key targets of interventions and to develop monitoring and surveillance tools that are crucial for the successful elimination and eradication of malaria.

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Year:  2012        PMID: 22495435     DOI: 10.1038/nrg3187

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  125 in total

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  51 in total

1.  Resisting resistance.

Authors:  Bernardo J Foth
Journal:  Nat Rev Microbiol       Date:  2012-07-16       Impact factor: 60.633

2.  Absence of Association between Polymorphisms in the RING E3 Ubiquitin Protein Ligase Gene and Ex Vivo Susceptibility to Conventional Antimalarial Drugs in Plasmodium falciparum Isolates from Dakar, Senegal.

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Journal:  Antimicrob Agents Chemother       Date:  2016-07-22       Impact factor: 5.191

Review 3.  PfCRT and its role in antimalarial drug resistance.

Authors:  Andrea Ecker; Adele M Lehane; Jérôme Clain; David A Fidock
Journal:  Trends Parasitol       Date:  2012-09-25

4.  Sequence-based association and selection scans identify drug resistance loci in the Plasmodium falciparum malaria parasite.

Authors:  Daniel J Park; Amanda K Lukens; Daniel E Neafsey; Stephen F Schaffner; Hsiao-Han Chang; Clarissa Valim; Ulf Ribacke; Daria Van Tyne; Kevin Galinsky; Meghan Galligan; Justin S Becker; Daouda Ndiaye; Souleymane Mboup; Roger C Wiegand; Daniel L Hartl; Pardis C Sabeti; Dyann F Wirth; Sarah K Volkman
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-23       Impact factor: 11.205

Review 5.  Advances in genetics and genomics: use and limitations in achieving malaria elimination goals.

Authors:  Sharmini Gunawardena; Nadira D Karunaweera
Journal:  Pathog Glob Health       Date:  2015-05       Impact factor: 2.894

6.  Malaria diagnostics and surveillance in the post-genomic era.

Authors:  N W Lucchi; J Oberstaller; J C Kissinger; V Udhayakumar
Journal:  Public Health Genomics       Date:  2013-03-18       Impact factor: 2.000

7.  Clonal outbreak of Plasmodium falciparum infection in eastern Panama.

Authors:  Nicanor Obaldia; Nicholas K Baro; Jose E Calzada; Ana M Santamaria; Rachel Daniels; Wesley Wong; Hsiao-Han Chang; Elizabeth J Hamilton; Myriam Arevalo-Herrera; Socrates Herrera; Dyann F Wirth; Daniel L Hartl; Matthias Marti; Sarah K Volkman
Journal:  J Infect Dis       Date:  2014-10-21       Impact factor: 5.226

8.  Genomic insights into the other malaria.

Authors:  Neil Hall
Journal:  Nat Genet       Date:  2012-09       Impact factor: 38.330

9.  Distinct genomic architecture of Plasmodium falciparum populations from South Asia.

Authors:  Shiva Kumar; Devaraja G Mudeppa; Ambika Sharma; Anjali Mascarenhas; Rashmi Dash; Ligia Pereira; Riaz Basha Shaik; Jennifer N Maki; John White; Wenyun Zuo; Shripad Tuljapurkar; Manoj T Duraisingh; Edwin Gomes; Laura Chery; Pradipsinh K Rathod
Journal:  Mol Biochem Parasitol       Date:  2016-07-22       Impact factor: 1.759

Review 10.  Molecular epidemiology, phylogeny and evolution of the filarial nematode Wuchereria bancrofti.

Authors:  Scott T Small; Daniel J Tisch; Peter A Zimmerman
Journal:  Infect Genet Evol       Date:  2014-08-29       Impact factor: 3.342

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