Literature DB >> 22495288

Phase diagrams and kinetics of phase transitions in protein solutions.

Peter G Vekilov1.   

Abstract

The phase behavior of proteins is of interest for fundamental and practical reasons. The nucleation of new phases is one of the last major unresolved problems of nature. The formation of protein condensed phases (crystals, polymers, and other solid aggregates, as well as dense liquids and gels) underlies pathological conditions, plays a crucial role in the biological function of the respective protein, or is an essential part of laboratory and industrial processes. In this review, we focus on phase transitions of proteins in their properly folded state. We first summarize the recently acquired understanding of physical processes underlying the phase diagrams of the protein solutions and the thermodynamics of protein phase transitions. Then we review recent findings on the kinetics of nucleation of dense liquid droplets and crystals. We explore the transition from nucleation to spinodal decomposition for liquid-liquid separation and introduce the new concept of solution-to-crystal spinodal. We review the two-step mechanism of protein crystal nucleation, in which mesoscopic metastable protein clusters serve as precursors to the ordered crystal nuclei. The concepts and mechanisms reviewed here provide powerful tools for control of the nucleation process by varying the solution thermodynamic parameters.

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Year:  2012        PMID: 22495288     DOI: 10.1088/0953-8984/24/19/193101

Source DB:  PubMed          Journal:  J Phys Condens Matter        ISSN: 0953-8984            Impact factor:   2.333


  10 in total

1.  Protein collapse driven against solvation free energy without H-bonds.

Authors:  Deepti Karandur; Robert C Harris; B Montgomery Pettitt
Journal:  Protein Sci       Date:  2015-08-08       Impact factor: 6.725

2.  A stepwise mechanism for aqueous two-phase system formation in concentrated antibody solutions.

Authors:  Bradley A Rogers; Kelvin B Rembert; Matthew F Poyton; Halil I Okur; Amanda R Kale; Tinglu Yang; Jifeng Zhang; Paul S Cremer
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-23       Impact factor: 11.205

Review 3.  Self-organization across scales: from molecules to organisms.

Authors:  Tanumoy Saha; Milos Galic
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-05-26       Impact factor: 6.237

4.  Physico-chemical characteristics of evaporating respiratory fluid droplets.

Authors:  Eric P Vejerano; Linsey C Marr
Journal:  J R Soc Interface       Date:  2018-02       Impact factor: 4.118

5.  Quantifying Nucleation In Vivo Reveals the Physical Basis of Prion-like Phase Behavior.

Authors:  Tarique Khan; Tejbir S Kandola; Jianzheng Wu; Shriram Venkatesan; Ellen Ketter; Jeffrey J Lange; Alejandro Rodríguez Gama; Andrew Box; Jay R Unruh; Malcolm Cook; Randal Halfmann
Journal:  Mol Cell       Date:  2018-07-05       Impact factor: 17.970

6.  A nucleation barrier spring-loads the CBM signalosome for binary activation.

Authors:  Alejandro Rodriguez Gama; Tayla Miller; Jeffrey J Lange; Jay R Unruh; Randal Halfmann
Journal:  Elife       Date:  2022-06-21       Impact factor: 8.713

7.  Oligomers of Heat-Shock Proteins: Structures That Don't Imply Function.

Authors:  William M Jacobs; Tuomas P J Knowles; Daan Frenkel
Journal:  PLoS Comput Biol       Date:  2016-02-29       Impact factor: 4.475

8.  Reversible Kinetic Trapping of FUS Biomolecular Condensates.

Authors:  Sayantan Chatterjee; Yelena Kan; Mateusz Brzezinski; Kaloian Koynov; Roshan Mammen Regy; Anastasia C Murthy; Kathleen A Burke; Jasper J Michels; Jeetain Mittal; Nicolas L Fawzi; Sapun H Parekh
Journal:  Adv Sci (Weinh)       Date:  2021-12-04       Impact factor: 16.806

9.  Solubility and aggregation of Gly(5) in water.

Authors:  Deepti Karandur; Ka-Yiu Wong; B Montgomery Pettitt
Journal:  J Phys Chem B       Date:  2014-07-30       Impact factor: 2.991

10.  Multiphase water-in-oil emulsion droplets for cell-free transcription-translation.

Authors:  Paola Torre; Christine D Keating; Sheref S Mansy
Journal:  Langmuir       Date:  2014-05-12       Impact factor: 3.882

  10 in total

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