Literature DB >> 22492456

Freeze-coring method for characterization of microbial community structure and function in wetland soils at high spatial resolution.

Alessandro G Franchini1, Josef Zeyer.   

Abstract

A simple freeze-coring method was developed to obtain structurally intact cores from wetland soils. A copper tube was inserted into the wetland and filled with ethanol and dry ice to freeze the surrounding soil. Biological structure and function could be analyzed, and labile compounds such as mRNA were recovered.

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Year:  2012        PMID： 22492456      PMCID： PMC3370540          DOI： 10.1128/AEM.00133-12

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  21 in total

1.  The mcrA gene as an alternative to 16S rRNA in the phylogenetic analysis of methanogen populations in landfill.

Authors:  Philip E Luton; Jonathan M Wayne; Richard J Sharp; Paul W Riley
Journal:  Microbiology       Date:  2002-11       Impact factor: 2.777

2.  Links between methane flux and transcriptional activities of methanogens and methane oxidizers in a blanket peat bog.

Authors:  Thomas E Freitag; Sylvia Toet; Phil Ineson; James I Prosser
Journal:  FEMS Microbiol Ecol       Date:  2010-03-30       Impact factor: 4.194

3.  Methanotrophic diversity in high arctic wetlands on the islands of Svalbard (Norway)--denaturing gradient gel electrophoresis analysis of soil DNA and enrichment cultures.

Authors:  Ingvild Wartiainen; Anne Grethe Hestnes; Mette M Svenning
Journal:  Can J Microbiol       Date:  2003-10       Impact factor: 2.419

4.  Abundances and potential activities of nitrogen cycling microbial communities along a chronosequence of a glacier forefield.

Authors:  Robert Brankatschk; Stefanie Töwe; Kristina Kleineidam; Michael Schloter; Josef Zeyer
Journal:  ISME J       Date:  2010-12-02       Impact factor: 10.302

5.  Abundance, distribution and potential activity of methane oxidizing bacteria in permafrost soils from the Lena Delta, Siberia.

Authors:  Susanne Liebner; Dirk Wagner
Journal:  Environ Microbiol       Date:  2007-01       Impact factor: 5.491

6.  Grazing affects methanotroph activity and diversity in an alpine meadow soil.

Authors:  Guy C J Abell; Nancy Stralis-Pavese; Angela Sessitsch; Levente Bodrossy
Journal:  Environ Microbiol Rep       Date:  2009-09-23       Impact factor: 3.541

7.  Molecular Ecological Analysis of Methanogens and Methanotrophs in Blanket Bog Peat.

Authors: 
Journal:  Microb Ecol       Date:  1999-10       Impact factor: 4.552

8.  Presence, distribution, and diversity of iron-oxidizing bacteria at a landfill leachate-impacted groundwater surface water interface.

Authors:  Ran Yu; Ping Gan; Allison A Mackay; Shouliang Zhang; Barth F Smets
Journal:  FEMS Microbiol Ecol       Date:  2009-10-13       Impact factor: 4.194

9.  Biogeochemical processes and microbial characteristics across groundwater-surface water boundaries of the Hanford Reach of the Columbia River.

Authors:  Duane P Moser; James K Fredrickson; David R Geist; Evan V Arntzen; Aaron D Peacock; Shu-Mei W Li; Tina Spadoni; James P McKinley
Journal:  Environ Sci Technol       Date:  2003-11-15       Impact factor: 9.028

10.  Depth distribution of microbial production and oxidation of methane in northern boreal peatlands.

Authors:  I Sundh; M Nilsson; G Granberg; B H Svensson
Journal:  Microb Ecol       Date:  1994-05       Impact factor: 4.552
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  2 in total

1.  Methanotrophic and Methanogenic Communities in Swiss Alpine Fens Dominated by Carex rostrata and Eriophorum angustifolium.

Authors:  Simrita Cheema; Josef Zeyer; Ruth Henneberger
Journal:  Appl Environ Microbiol       Date:  2015-06-19       Impact factor: 4.792

2.  Ex Situ Culturing Experiments Revealed Psychrophilic Hydrogentrophic Methanogenesis Being the Potential Dominant Methane-Producing Pathway in Subglacial Sediment in Larsemann Hills, Antarctic.

Authors:  Hongmei Ma; Wenkai Yan; Xiang Xiao; Guitao Shi; Yuansheng Li; Bo Sun; Yinke Dou; Yu Zhang
Journal:  Front Microbiol       Date:  2018-02-21       Impact factor: 5.640
  2 in total

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