Literature DB >> 14663494

Methanotrophic diversity in high arctic wetlands on the islands of Svalbard (Norway)--denaturing gradient gel electrophoresis analysis of soil DNA and enrichment cultures.

Ingvild Wartiainen1, Anne Grethe Hestnes, Mette M Svenning.   

Abstract

The methanotrophic community in arctic soil from the islands of Svalbard, Norway (78 degrees N) was analysed by combining group-specific PCR with PCR of the highly variable V3 region of the 16S rRNA gene and then by denaturing gradient gel electrophoresis (DGGE). Selected bands were sequenced for identification. The analyses were performed with DNA extracted directly from soil and from enrichment cultures at 10 and 20 degrees C. The two genera Methylobacter and Methylosinus were found in all localities studied. The DGGE band patterns were simple, and DNA fragments with single base differences were separated. The arctic tundra is a potential source of extensive methane emission due to climatic warming because of its large reservoirs of stored organic carbon. Higher temperatures due to climatic warming can cause increased methane production, and the abundance and activity of methane-oxidizing bacteria in the arctic soil may be important regulators for methane emission to the atmosphere.

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Year:  2003        PMID: 14663494     DOI: 10.1139/w03-080

Source DB:  PubMed          Journal:  Can J Microbiol        ISSN: 0008-4166            Impact factor:   2.419


  13 in total

1.  Community structure, abundance, and activity of methanotrophs in the Zoige wetland of the Tibetan Plateau.

Authors:  Juanli Yun; Guoqiang Zhuang; Anzhou Ma; Hongguang Guo; Yanfen Wang; Hongxun Zhang
Journal:  Microb Ecol       Date:  2011-12-10       Impact factor: 4.552

2.  Shifts in identity and activity of methanotrophs in arctic lake sediments in response to temperature changes.

Authors:  Ruo He; Matthew J Wooller; John W Pohlman; John Quensen; James M Tiedje; Mary Beth Leigh
Journal:  Appl Environ Microbiol       Date:  2012-04-20       Impact factor: 4.792

3.  Freeze-coring method for characterization of microbial community structure and function in wetland soils at high spatial resolution.

Authors:  Alessandro G Franchini; Josef Zeyer
Journal:  Appl Environ Microbiol       Date:  2012-04-06       Impact factor: 4.792

4.  Stable isotope probing analysis of the diversity and activity of methanotrophic bacteria in soils from the Canadian high Arctic.

Authors:  Christine Martineau; Lyle G Whyte; Charles W Greer
Journal:  Appl Environ Microbiol       Date:  2010-07-09       Impact factor: 4.792

5.  Environmental transcription of mmoX by methane-oxidizing Proteobacteria in a subarctic Palsa Peatland.

Authors:  Susanne Liebner; Mette M Svenning
Journal:  Appl Environ Microbiol       Date:  2012-10-26       Impact factor: 4.792

6.  Metatranscriptomic analysis of arctic peat soil microbiota.

Authors:  Alexander T Tveit; Tim Urich; Mette M Svenning
Journal:  Appl Environ Microbiol       Date:  2014-07-11       Impact factor: 4.792

7.  Genome sequence of the Arctic methanotroph Methylobacter tundripaludum SV96.

Authors:  Mette M Svenning; Anne Grethe Hestnes; Ingvild Wartiainen; Lisa Y Stein; Martin G Klotz; Marina G Kalyuzhnaya; Anja Spang; Françoise Bringel; Stéphane Vuilleumier; Aurélie Lajus; Claudine Médigue; David C Bruce; Jan-Fang Cheng; Lynne Goodwin; Natalia Ivanova; James Han; Cliff S Han; Loren Hauser; Brittany Held; Miriam L Land; Alla Lapidus; Susan Lucas; Matt Nolan; Sam Pitluck; Tanja Woyke
Journal:  J Bacteriol       Date:  2011-07-01       Impact factor: 3.490

8.  Diversity of aerobic methanotrophic bacteria in a permafrost active layer soil of the Lena Delta, Siberia.

Authors:  Susanne Liebner; Katja Rublack; Torben Stuehrmann; Dirk Wagner
Journal:  Microb Ecol       Date:  2008-07-01       Impact factor: 4.552

9.  Methanotroph populations and CH4 oxidation potentials in high-Arctic peat are altered by herbivory induced vegetation change.

Authors:  Edda M Rainer; Christophe V W Seppey; Alexander T Tveit; Mette M Svenning
Journal:  FEMS Microbiol Ecol       Date:  2020-10-10       Impact factor: 4.194

10.  Organic carbon transformations in high-Arctic peat soils: key functions and microorganisms.

Authors:  Alexander Tveit; Rainer Schwacke; Mette M Svenning; Tim Urich
Journal:  ISME J       Date:  2012-09-06       Impact factor: 10.302

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