Literature DB >> 22482649

Optimized generation of high resolution breast anthropomorphic software phantoms.

David D Pokrajac1, Andrew D A Maidment, Predrag R Bakic.   

Abstract

PURPOSE: The authors present an efficient method for generating anthropomorphic software breast phantoms with high spatial resolution. Employing the same region growing principles as in their previous algorithm for breast anatomy simulation, the present method has been optimized for computational complexity to allow for fast generation of the large number of phantoms required in virtual clinical trials of breast imaging.
METHODS: The new breast anatomy simulation method performs a direct calculation of the Cooper's ligaments (i.e., the borders between simulated adipose compartments). The calculation corresponds to quadratic decision boundaries of a maximum a posteriori classifier. The method is multiscale due to the use of octree-based recursive partitioning of the phantom volume. The method also provides user-control of the thickness of the simulated Cooper's ligaments and skin.
RESULTS: Using the proposed method, the authors have generated phantoms with voxel size in the range of (25-1000 μm)(3)∕voxel. The power regression of the simulation time as a function of the reciprocal voxel size yielded a log-log slope of 1.95 (compared to a slope of 4.53 of our previous region growing algorithm).
CONCLUSIONS: A new algorithm for computer simulation of breast anatomy has been proposed that allows for fast generation of high resolution anthropomorphic software phantoms.

Mesh:

Year:  2012        PMID: 22482649      PMCID: PMC3337667          DOI: 10.1118/1.3697523

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  16 in total

1.  A three-dimensional breast software phantom for mammography simulation.

Authors:  K Bliznakova; Z Bliznakov; V Bravou; Z Kolitsi; N Pallikarakis
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2.  Mammogram synthesis using a 3D simulation. I. Breast tissue model and image acquisition simulation.

Authors:  Predrag R Bakic; Michael Albert; Dragana Brzakovic; Andrew D A Maidment
Journal:  Med Phys       Date:  2002-09       Impact factor: 4.071

3.  Separation of human adipocytes by size: hypertrophic fat cells display distinct gene expression.

Authors:  Margareta Jernås; Jenny Palming; Kajsa Sjöholm; Eva Jennische; Per-Arne Svensson; Britt G Gabrielsson; Max Levin; Anders Sjögren; Mats Rudemo; Theodore C Lystig; Björn Carlsson; Lena M S Carlsson; Malin Lönn
Journal:  FASEB J       Date:  2006-06-05       Impact factor: 5.191

4.  Of cup and bra size: reply to a prospective study of breast size and premenopausal breast cancer incidence.

Authors:  Anita Ringberg; Erika Bågeman; Carsten Rose; Christian Ingvar; Helena Jernström
Journal:  Int J Cancer       Date:  2006-11-01       Impact factor: 7.396

5.  A high-resolution voxel phantom of the breast for dose calculations in mammography.

Authors:  Christoph Hoeschen; Ute Fill; Maria Zankl; Werner Panzer; Dieter Regulla; Wilfried Döhring
Journal:  Radiat Prot Dosimetry       Date:  2005       Impact factor: 0.972

6.  Introducing DeBRa: a detailed breast model for radiological studies.

Authors:  Andy K W Ma; Spencer Gunn; Dimitra G Darambara
Journal:  Phys Med Biol       Date:  2009-06-26       Impact factor: 3.609

7.  Methodology for generating a 3D computerized breast phantom from empirical data.

Authors:  Christina M Li; W Paul Segars; Georgia D Tourassi; John M Boone; James T Dobbins
Journal:  Med Phys       Date:  2009-07       Impact factor: 4.071

8.  Development and characterization of an anthropomorphic breast software phantom based upon region-growing algorithm.

Authors:  Predrag R Bakic; Cuiping Zhang; Andrew D A Maidment
Journal:  Med Phys       Date:  2011-06       Impact factor: 4.071

9.  Accelerating Monte Carlo simulations of photon transport in a voxelized geometry using a massively parallel graphics processing unit.

Authors:  Andreu Badal; Aldo Badano
Journal:  Med Phys       Date:  2009-11       Impact factor: 4.071

10.  Breast skin thickness: normal range and causes of thickening shown on film-screen mammography.

Authors:  T L Pope; M E Read; T Medsker; A J Buschi; A N Brenbridge
Journal:  J Can Assoc Radiol       Date:  1984-12
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  18 in total

1.  A statistically defined anthropomorphic software breast phantom.

Authors:  Beverly A Lau; Ingrid Reiser; Robert M Nishikawa; Predrag R Bakic
Journal:  Med Phys       Date:  2012-06       Impact factor: 4.071

2.  Population of 224 realistic human subject-based computational breast phantoms.

Authors:  David W Erickson; Jered R Wells; Gregory M Sturgeon; Ehsan Samei; James T Dobbins; W Paul Segars; Joseph Y Lo
Journal:  Med Phys       Date:  2016-01       Impact factor: 4.071

3.  Methodology based on genetic heuristics for in-vivo characterizing the patient-specific biomechanical behavior of the breast tissues.

Authors:  M A Lago; M J Rúperez; F Martínez-Martínez; S Martínez-Sanchis; P R Bakic; C Monserrat
Journal:  Expert Syst Appl       Date:  2015-11-30       Impact factor: 6.954

4.  Fast one-dimensional wave-front propagation for x-ray differential phase-contrast imaging.

Authors:  Johannes Wolf; Andreas Malecki; Jonathan Sperl; Michael Chabior; Markus Schüttler; Dirk Bequé; Cristina Cozzini; Franz Pfeiffer
Journal:  Biomed Opt Express       Date:  2014-09-29       Impact factor: 3.732

5.  Evaluation of non-Gaussian statistical properties in virtual breast phantoms.

Authors:  Craig K Abbey; Predrag R Bakic; David D Pokrajac; Andrew D A Maidment; Miguel P Eckstein; John M Boone
Journal:  J Med Imaging (Bellingham)       Date:  2019-06-14

6.  Location- and lesion-dependent estimation of mammographic background tissue complexity.

Authors:  Ali Avanaki; Kathryn Espig; Tom Kimpe
Journal:  J Med Imaging (Bellingham)       Date:  2017-01-12

7.  A virtual trial framework for quantifying the detectability of masses in breast tomosynthesis projection data.

Authors:  Stefano Young; Predrag R Bakic; Kyle J Myers; Robert J Jennings; Subok Park
Journal:  Med Phys       Date:  2013-05       Impact factor: 4.071

8.  Development of 3D patient-based super-resolution digital breast phantoms using machine learning.

Authors:  Marco Caballo; Christian Fedon; Luca Brombal; Ritse Mann; Renata Longo; Ioannis Sechopoulos
Journal:  Phys Med Biol       Date:  2018-11-12       Impact factor: 3.609

9.  Interactions of lesion detectability and size across single-slice DBT and 3D DBT.

Authors:  Miguel A Lago; Craig K Abbey; Bruno Barufaldi; Predrag R Bakic; Susan P Weinstein; Andrew D Maidment; Miguel P Eckstein
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2018-03-07

10.  Evaluation of Convolutional Neural Networks for Search in 1/f 2.8 Filtered Noise and Digital Breast Tomosynthesis Phantoms.

Authors:  Aditya Jonnalagadda; Miguel A Lago; Bruno Barufaldi; Predrag R Bakic; Craig K Abbey; Andrew D Maidment; Miguel P Eckstein
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2020-03-16
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