Literature DB >> 22472602

Highlights from recently determined structures of membrane proteins: a focus on channels and transporters.

Giuliano Sciara1, Filippo Mancia.   

Abstract

After decades of absent or lackluster growth, recent years have at long last witnessed an exponential growth in the number of novel membrane protein structures determined. Every single achievement has had a tremendous impact on the scientific community, providing an unprecedented wealth of information that typically only an atomic resolution structure can contribute to our molecular understanding of how a protein functions. Presented here is a review of some of the most exciting novel structures of channels and transporters determined by X-ray crystallography in the last two years, and a discussion of their analogies, differences and mechanistic implications.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22472602      PMCID: PMC3392460          DOI: 10.1016/j.sbi.2012.03.005

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  53 in total

1.  The structural basis of modularity in ECF-type ABC transporters.

Authors:  Guus B Erkens; Ronnie P-A Berntsson; Faizah Fulyani; Maria Majsnerowska; Andreja Vujičić-Žagar; Josy Ter Beek; Bert Poolman; Dirk Jan Slotboom
Journal:  Nat Struct Mol Biol       Date:  2011-06-26       Impact factor: 15.369

2.  pH-dependent gating in a FocA formate channel.

Authors:  Wei Lü; Juan Du; Tobias Wacker; Elke Gerbig-Smentek; Susana L A Andrade; Oliver Einsle
Journal:  Science       Date:  2011-04-15       Impact factor: 47.728

3.  Principles of activation and permeation in an anion-selective Cys-loop receptor.

Authors:  Ryan E Hibbs; Eric Gouaux
Journal:  Nature       Date:  2011-05-15       Impact factor: 49.962

Review 4.  High throughput platforms for structural genomics of integral membrane proteins.

Authors:  Filippo Mancia; James Love
Journal:  Curr Opin Struct Biol       Date:  2011-07-30       Impact factor: 6.809

Review 5.  Structure of ABC transporters.

Authors:  Joseph K Zolnerciks; Edward J Andress; Michael Nicolaou; Kenneth J Linton
Journal:  Essays Biochem       Date:  2011-09-07       Impact factor: 8.000

6.  Structure and mechanism of the uracil transporter UraA.

Authors:  Feiran Lu; Shuo Li; Yang Jiang; Jing Jiang; He Fan; Guifeng Lu; Dong Deng; Shangyu Dang; Xu Zhang; Jiawei Wang; Nieng Yan
Journal:  Nature       Date:  2011-03-20       Impact factor: 49.962

7.  Structural determinants of water permeation through aquaporin-1.

Authors:  K Murata; K Mitsuoka; T Hirai; T Walz; P Agre; J B Heymann; A Engel; Y Fujiyoshi
Journal:  Nature       Date:  2000-10-05       Impact factor: 49.962

8.  Structure of the membrane domain of respiratory complex I.

Authors:  Rouslan G Efremov; Leonid A Sazanov
Journal:  Nature       Date:  2011-08-07       Impact factor: 49.962

9.  Crystal structure of the channelrhodopsin light-gated cation channel.

Authors:  Hideaki E Kato; Feng Zhang; Ofer Yizhar; Charu Ramakrishnan; Tomohiro Nishizawa; Kunio Hirata; Jumpei Ito; Yusuke Aita; Tomoya Tsukazaki; Shigehiko Hayashi; Peter Hegemann; Andrés D Maturana; Ryuichiro Ishitani; Karl Deisseroth; Osamu Nureki
Journal:  Nature       Date:  2012-01-22       Impact factor: 49.962

10.  Crystal structure of a bacterial homologue of the bile acid sodium symporter ASBT.

Authors:  Nien-Jen Hu; So Iwata; Alexander D Cameron; David Drew
Journal:  Nature       Date:  2011-10-05       Impact factor: 49.962

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  5 in total

1.  Drug screening strategy for human membrane proteins: from NMR protein backbone structure to in silica- and NMR-screened hits.

Authors:  Steffen Lindert; Innokentiy Maslennikov; Ellis J C Chiu; Levi C Pierce; J Andrew McCammon; Senyon Choe
Journal:  Biochem Biophys Res Commun       Date:  2014-02-10       Impact factor: 3.575

2.  Structure determination of an integral membrane protein at room temperature from crystals in situ.

Authors:  Danny Axford; James Foadi; Nien Jen Hu; Hassanul Ghani Choudhury; So Iwata; Konstantinos Beis; Gwyndaf Evans; Yilmaz Alguel
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-05-14

3.  SCMMTP: identifying and characterizing membrane transport proteins using propensity scores of dipeptides.

Authors:  Yi-Fan Liou; Tamara Vasylenko; Chia-Lun Yeh; Wei-Chun Lin; Shih-Hsiang Chiu; Phasit Charoenkwan; Li-Sun Shu; Shinn-Ying Ho; Hui-Ling Huang
Journal:  BMC Genomics       Date:  2015-12-09       Impact factor: 3.969

Review 4.  Understanding transporter specificity and the discrete appearance of channel-like gating domains in transporters.

Authors:  George Diallinas
Journal:  Front Pharmacol       Date:  2014-09-12       Impact factor: 5.810

Review 5.  Emerging Computational Methods for the Rational Discovery of Allosteric Drugs.

Authors:  Jeffrey R Wagner; Christopher T Lee; Jacob D Durrant; Robert D Malmstrom; Victoria A Feher; Rommie E Amaro
Journal:  Chem Rev       Date:  2016-04-13       Impact factor: 60.622

  5 in total

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