Literature DB >> 22461552

Complete genome sequence of Salmonella enterica subsp. enterica serovar Typhi P-stx-12.

Su Yean Ong1, Chandra Bhan Pratap, Xuehua Wan, Shaobin Hou, Ahmad Yamin Abdul Rahman, Jennifer A Saito, Gopal Nath, Maqsudul Alam.   

Abstract

We report here the complete genome sequence of Salmonella enterica subsp. enterica serovar Typhi P-stx-12, a clinical isolate obtained from a typhoid carrier in India.

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Year:  2012        PMID： 22461552      PMCID： PMC3318496          DOI： 10.1128/JB.00121-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  11 in total

1.  Basic local alignment search tool.

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2.  Identifying bacterial genes and endosymbiont DNA with Glimmer.

Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
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Journal:  Bioinformatics       Date:  2010-03-01       Impact factor: 6.937

5.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

6.  Typhoid fever and other salmonellosis: a continuing challenge.

Authors:  T Pang; Z A Bhutta; B B Finlay; M Altwegg
Journal:  Trends Microbiol       Date:  1995-07       Impact factor: 17.079

7.  Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18.

Authors:  J Parkhill; G Dougan; K D James; N R Thomson; D Pickard; J Wain; C Churcher; K L Mungall; S D Bentley; M T Holden; M Sebaihia; S Baker; D Basham; K Brooks; T Chillingworth; P Connerton; A Cronin; P Davis; R M Davies; L Dowd; N White; J Farrar; T Feltwell; N Hamlin; A Haque; T T Hien; S Holroyd; K Jagels; A Krogh; T S Larsen; S Leather; S Moule; P O'Gaora; C Parry; M Quail; K Rutherford; M Simmonds; J Skelton; K Stevens; S Whitehead; B G Barrell
Journal:  Nature       Date:  2001-10-25       Impact factor: 49.962

8.  Comparative genomics of Salmonella enterica serovar Typhi strains Ty2 and CT18.

Authors:  Wen Deng; Shian-Ren Liou; Guy Plunkett; George F Mayhew; Debra J Rose; Valerie Burland; Voula Kodoyianni; David C Schwartz; Frederick R Blattner
Journal:  J Bacteriol       Date:  2003-04       Impact factor: 3.490

9.  DIYA: a bacterial annotation pipeline for any genomics lab.

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View more
  8 in total

1.  The Genomic Blueprint of Salmonella enterica subspecies enterica serovar Typhi P-stx-12.

Authors:  Su Yean Ong; Chandra Bhan Pratap; Xuehua Wan; Shaobin Hou; Ahmad Yamin Abdul Rahman; Jennifer A Saito; Gopal Nath; Maqsudul Alam
Journal:  Stand Genomic Sci       Date:  2013-01-20

2.  Genome dynamics and evolution of Salmonella Typhi strains from the typhoid-endemic zones.

Authors:  Ramani Baddam; Narender Kumar; Sabiha Shaik; Aditya Kumar Lankapalli; Niyaz Ahmed
Journal:  Sci Rep       Date:  2014-12-12       Impact factor: 4.379

3.  Comparative genomics of closely related Salmonella enterica serovar Typhi strains reveals genome dynamics and the acquisition of novel pathogenic elements.

Authors:  Kien-Pong Yap; Han Ming Gan; Cindy Shuan Ju Teh; Lay Ching Chai; Kwai Lin Thong
Journal:  BMC Genomics       Date:  2014-11-20       Impact factor: 3.969

4.  Identification of Five Novel Salmonella Typhi-Specific Genes as Markers for Diagnosis of Typhoid Fever Using Single-Gene Target PCR Assays.

Authors:  Yuan Xin Goay; Kai Ling Chin; Clarissa Ling Ling Tan; Chiann Ying Yeoh; Ja'afar Nuhu Ja'afar; Abdul Rahman Zaidah; Suresh Venkata Chinni; Kia Kien Phua
Journal:  Biomed Res Int       Date:  2016-11-15       Impact factor: 3.411

5.  Salmonella enterica Serovar Typhi Lipopolysaccharide O-Antigen Modification Impact on Serum Resistance and Antibody Recognition.

Authors:  Erica Kintz; Christian Heiss; Ian Black; Nicholas Donohue; Naj Brown; Mark R Davies; Parastoo Azadi; Stephen Baker; Paul M Kaye; Marjan van der Woude
Journal:  Infect Immun       Date:  2017-03-23       Impact factor: 3.441

6.  Global MLST of Salmonella Typhi Revisited in Post-genomic Era: Genetic Conservation, Population Structure, and Comparative Genomics of Rare Sequence Types.

Authors:  Kien-Pong Yap; Wing S Ho; Han M Gan; Lay C Chai; Kwai L Thong
Journal:  Front Microbiol       Date:  2016-03-02       Impact factor: 5.640

7.  Complete Genome Sequence of Salmonella enterica subsp. enterica Serovar Typhi Isolate B/SF/13/03/195 Associated with a Typhoid Carrier in Pasir Mas, Kelantan, Malaysia.

Authors:  Salwani Muhamad Harish; Kee-Shin Sim; Fauziah Mohd Nor; Hani Mat Hussin; Wan Mansor Hamzah; Nazalan Najimudin; Ismail Aziah
Journal:  Genome Announc       Date:  2015-11-12

8.  Antibiotic Resistance, Core-Genome and Protein Expression in IncHI1 Plasmids in Salmonella Typhimurium.

Authors:  Tereza Kubasova; Darina Cejkova; Jitka Matiasovicova; Zuzana Sekelova; Ondrej Polansky; Matej Medvecky; Ivan Rychlik; Helena Juricova
Journal:  Genome Biol Evol       Date:  2016-06-13       Impact factor: 3.416
  8 in total

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