Literature DB >> 22458839

Time-resolved infrared detection of the proton and protein dynamics during photosynthetic oxygen evolution.

Takumi Noguchi1, Hiroyuki Suzuki, Masaya Tsuno, Miwa Sugiura, Chihiro Kato.   

Abstract

Photosynthetic oxygen evolution by plants and cyanobacteria is performed by water oxidation at the Mn(4)CaO(5) cluster in photosystem II. The reaction is known to proceed via a light-driven cycle of five intermediates called S(i) states (i = 0-4). However, the detailed reaction processes during the intermediate transitions remain unresolved. In this study, we have directly detected the proton and protein dynamics during the oxygen-evolving reactions using time-resolved infrared spectroscopy. The time courses of the absorption changes at 1400 and 2500 cm(-1), which represent the reactions and/or interaction changes of carboxylate groups and the changes in proton polarizability of strong hydrogen bonds, respectively, were monitored upon flash illumination. The results provided experimental evidence that during the S(3) → S(0) transition, drastic proton rearrangement, most likely reflecting the release of a proton from the catalytic site, takes place to form a transient state before the oxidation of the Mn(4)CaO(5) cluster that leads to O(2) formation. Early proton movement was also detected during the S(2) → S(3) transition. These observations reveal the common mechanism in which proton release facilitates the transfer of an electron from the Mn(4)CaO(5) cluster in the S(2) and S(3) states that already accumulate oxidizing equivalents. In addition, relatively slow rearrangement of carboxylate groups was detected in the S(0) → S(1) transition, which could contribute to the stabilization of the S(1) state. This study demonstrates that time-resolved infrared detection is a powerful method for elucidating the detailed molecular mechanism of photosynthetic oxygen evolution by pursuing the reactions of substrate and amino acid residues during the S-state transitions.

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Year:  2012        PMID: 22458839     DOI: 10.1021/bi300294n

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  15 in total

1.  The Mn₄Ca photosynthetic water-oxidation catalyst studied by simultaneous X-ray spectroscopy and crystallography using an X-ray free-electron laser.

Authors:  Rosalie Tran; Jan Kern; Johan Hattne; Sergey Koroidov; Julia Hellmich; Roberto Alonso-Mori; Nicholas K Sauter; Uwe Bergmann; Johannes Messinger; Athina Zouni; Junko Yano; Vittal K Yachandra
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2014-07-17       Impact factor: 6.237

Review 2.  Time-resolved infrared spectroscopy in the study of photosynthetic systems.

Authors:  Alberto Mezzetti; Winfried Leibl
Journal:  Photosynth Res       Date:  2016-09-27       Impact factor: 3.573

3.  D1-Asn-298 in photosystem II is involved in a hydrogen-bond network near the redox-active tyrosine YZ for proton exit during water oxidation.

Authors:  Ryo Nagao; Hanayo Ueoka-Nakanishi; Takumi Noguchi
Journal:  J Biol Chem       Date:  2017-10-18       Impact factor: 5.157

4.  Untangling the sequence of events during the S2 → S3 transition in photosystem II and implications for the water oxidation mechanism.

Authors:  Mohamed Ibrahim; Thomas Fransson; Ruchira Chatterjee; Mun Hon Cheah; Rana Hussein; Louise Lassalle; Kyle D Sutherlin; Iris D Young; Franklin D Fuller; Sheraz Gul; In-Sik Kim; Philipp S Simon; Casper de Lichtenberg; Petko Chernev; Isabel Bogacz; Cindy C Pham; Allen M Orville; Nicholas Saichek; Trent Northen; Alexander Batyuk; Sergio Carbajo; Roberto Alonso-Mori; Kensuke Tono; Shigeki Owada; Asmit Bhowmick; Robert Bolotovsky; Derek Mendez; Nigel W Moriarty; James M Holton; Holger Dobbek; Aaron S Brewster; Paul D Adams; Nicholas K Sauter; Uwe Bergmann; Athina Zouni; Johannes Messinger; Jan Kern; Vittal K Yachandra; Junko Yano
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-20       Impact factor: 11.205

Review 5.  Light-dependent production of dioxygen in photosynthesis.

Authors:  Junko Yano; Jan Kern; Vittal K Yachandra; Håkan Nilsson; Sergey Koroidov; Johannes Messinger
Journal:  Met Ions Life Sci       Date:  2015

Review 6.  Time-resolved infrared absorption spectroscopy applied to photoinduced reactions: how and why.

Authors:  Alberto Mezzetti; Josefine Schnee; Andrea Lapini; Mariangela Di Donato
Journal:  Photochem Photobiol Sci       Date:  2022-02-21       Impact factor: 3.982

7.  No observable conformational changes in PSII.

Authors:  Nicholas K Sauter; Nathaniel Echols; Paul D Adams; Petrus H Zwart; Jan Kern; Aaron S Brewster; Sergey Koroidov; Roberto Alonso-Mori; Athina Zouni; Johannes Messinger; Uwe Bergmann; Junko Yano; Vittal K Yachandra
Journal:  Nature       Date:  2016-05-19       Impact factor: 49.962

8.  Substitution of the D1-Asn87 site in photosystem II of cyanobacteria mimics the chloride-binding characteristics of spinach photosystem II.

Authors:  Gourab Banerjee; Ipsita Ghosh; Christopher J Kim; Richard J Debus; Gary W Brudvig
Journal:  J Biol Chem       Date:  2017-12-20       Impact factor: 5.157

9.  Detection of an intermediary, protonated water cluster in photosynthetic oxygen evolution.

Authors:  Brandon C Polander; Bridgette A Barry
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-11       Impact factor: 11.205

Review 10.  Proton transport facilitating water-oxidation: the role of second sphere ligands surrounding the catalytic metal cluster.

Authors:  Han Bao; Preston L Dilbeck; Robert L Burnap
Journal:  Photosynth Res       Date:  2013-08-24       Impact factor: 3.573

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