Literature DB >> 22442566

Theoretical principles underlying optical stimulation of a channelrhodopsin-2 positive pyramidal neuron.

Thomas J Foutz1, Richard L Arlow, Cameron C McIntyre.   

Abstract

Optogenetics is an emerging field of neuromodulation that permits scaled, millisecond temporal control of the membrane dynamics of genetically targeted cells using light. Optogenetic technology has revolutionized neuroscience research; however, numerous biophysical questions remain on the optical and neuronal factors impacting the modulation of neural activity with photon-sensitive ion channels. To begin to address such questions, we developed a computational tool to explore the underlying principles of optogenetic neural stimulation. This "light-neuron" model consists of theoretical representations of the light dynamics generated by a fiber optic in brain tissue, coupled to a multicompartment cable model of a cortical pyramidal neuron embedded with channelrhodopsin-2 (ChR2) membrane dynamics. Simulations revealed that the large energies required to generate an action potential are primarily due to the limited conductivity of ChR2, and that the major determinants of stimulation threshold are the surface area of illuminated cell membrane and proximity to the light source. Our results predict that the activation threshold is sensitive to many of the properties of ChR2 (density, conductivity, and kinetics), tissue medium (scattering and absorbance), and the fiber-optic light source (diameter and numerical aperture). We also illustrate the impact of redistributing the ChR2 expression density (uniform vs. nonuniform) on the activation threshold. The model system developed in this study represents a scientific instrument to characterize the effects of optogenetic neuromodulation, as well as an engineering design tool to help guide future development of optogenetic technology.

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Year:  2012        PMID: 22442566      PMCID: PMC3378402          DOI: 10.1152/jn.00501.2011

Source DB:  PubMed          Journal:  J Neurophysiol        ISSN: 0022-3077            Impact factor:   2.714


  39 in total

1.  Orderly recruitment of motor units under optical control in vivo.

Authors:  Michael E Llewellyn; Kimberly R Thompson; Karl Deisseroth; Scott L Delp
Journal:  Nat Med       Date:  2010-09-26       Impact factor: 53.440

Review 2.  Optogenetic neuromodulation.

Authors:  Jaimie M Henderson; Thais Federici; Nicholas Boulis
Journal:  Neurosurgery       Date:  2009-05       Impact factor: 4.654

3.  Ultrafast optogenetic control.

Authors:  Lisa A Gunaydin; Ofer Yizhar; André Berndt; Vikaas S Sohal; Karl Deisseroth; Peter Hegemann
Journal:  Nat Neurosci       Date:  2010-01-17       Impact factor: 24.884

4.  Distinct contributions of Na(v)1.6 and Na(v)1.2 in action potential initiation and backpropagation.

Authors:  Wenqin Hu; Cuiping Tian; Tun Li; Mingpo Yang; Han Hou; Yousheng Shu
Journal:  Nat Neurosci       Date:  2009-07-26       Impact factor: 24.884

5.  Two-photon excitation of channelrhodopsin-2 at saturation.

Authors:  John Peter Rickgauer; David W Tank
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-14       Impact factor: 11.205

6.  Two open states with progressive proton selectivities in the branched channelrhodopsin-2 photocycle.

Authors:  André Berndt; Matthias Prigge; Dietrich Gradmann; Peter Hegemann
Journal:  Biophys J       Date:  2010-03-03       Impact factor: 4.033

7.  Channelrhodopsin-2 localised to the axon initial segment.

Authors:  Matthew S Grubb; Juan Burrone
Journal:  PLoS One       Date:  2010-10-29       Impact factor: 3.240

8.  Millisecond-timescale optical control of neural dynamics in the nonhuman primate brain.

Authors:  Xue Han; Xiaofeng Qian; Jacob G Bernstein; Hui-Hui Zhou; Giovanni Talei Franzesi; Patrick Stern; Roderick T Bronson; Ann M Graybiel; Robert Desimone; Edward S Boyden
Journal:  Neuron       Date:  2009-04-30       Impact factor: 17.173

9.  Myosin-dependent targeting of transmembrane proteins to neuronal dendrites.

Authors:  Tommy L Lewis; Tianyi Mao; Karel Svoboda; Don B Arnold
Journal:  Nat Neurosci       Date:  2009-04-19       Impact factor: 24.884

10.  Optogenetic control of epileptiform activity.

Authors:  Jan Tønnesen; Andreas T Sørensen; Karl Deisseroth; Cecilia Lundberg; Merab Kokaia
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-06       Impact factor: 11.205

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  26 in total

Review 1.  Optrodes for combined optogenetics and electrophysiology in live animals.

Authors:  Suzie Dufour; Yves De Koninck
Journal:  Neurophotonics       Date:  2015-07-02       Impact factor: 3.593

2.  Optogenetic versus Electrical Stimulation of Human Cardiomyocytes: Modeling Insights.

Authors:  John C Williams; Emilia Entcheva
Journal:  Biophys J       Date:  2015-04-21       Impact factor: 4.033

3.  In vivo optogenetic stimulation of the rodent central nervous system.

Authors:  Michelle M Sidor; Thomas J Davidson; Kay M Tye; Melissa R Warden; Karl Diesseroth; Colleen A McClung
Journal:  J Vis Exp       Date:  2015-01-15       Impact factor: 1.355

4.  Minimal time spiking in various ChR2-controlled neuron models.

Authors:  Vincent Renault; Michèle Thieullen; Emmanuel Trélat
Journal:  J Math Biol       Date:  2017-06-29       Impact factor: 2.259

5.  Characterization of fiber-optic light delivery and light-induced temperature changes in a rodent brain for precise optogenetic neuromodulation.

Authors:  Younghoon Shin; Minsu Yoo; Hyung-Sun Kim; Sung-Ki Nam; Hyoung-Ihl Kim; Sun-Kyu Lee; Sohee Kim; Hyuk-Sang Kwon
Journal:  Biomed Opt Express       Date:  2016-10-06       Impact factor: 3.732

6.  Fabrication and utility of a transparent graphene neural electrode array for electrophysiology, in vivo imaging, and optogenetics.

Authors:  Dong-Wook Park; Sarah K Brodnick; Jared P Ness; Farid Atry; Lisa Krugner-Higby; Amelia Sandberg; Solomon Mikael; Thomas J Richner; Joseph Novello; Hyungsoo Kim; Dong-Hyun Baek; Jihye Bong; Seth T Frye; Sanitta Thongpang; Kyle I Swanson; Wendell Lake; Ramin Pashaie; Justin C Williams; Zhenqiang Ma
Journal:  Nat Protoc       Date:  2016-10-13       Impact factor: 13.491

7.  Optogenetic control of serotonin and dopamine release in Drosophila larvae.

Authors:  Ning Xiao; Eve Privman; B Jill Venton
Journal:  ACS Chem Neurosci       Date:  2014-06-04       Impact factor: 4.418

8.  Optogenetic micro-electrocorticography for modulating and localizing cerebral cortex activity.

Authors:  Thomas J Richner; Sanitta Thongpang; Sarah K Brodnick; Amelia A Schendel; Ryan W Falk; Lisa A Krugner-Higby; Ramin Pashaie; Justin C Williams
Journal:  J Neural Eng       Date:  2014-01-20       Impact factor: 5.379

9.  Fabrication and analysis of microfiber array platform for optogenetics with cellular resolution.

Authors:  Jian-Hong Chen; Ming-Yi Chou; Chien-Yuan Pan; Lon A Wang
Journal:  Biomed Opt Express       Date:  2016-10-05       Impact factor: 3.732

10.  Estimating cortical column sensory networks in rodents from micro-electrocorticograph (μECoG) recordings.

Authors:  Ricardo Pizarro; Tom Richner; Sarah Brodnick; Sanitta Thongpang; Justin Williams; Barry Van Veen
Journal:  Neuroimage       Date:  2017-09-23       Impact factor: 6.556

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