Literature DB >> 22431222

Charge-site-dependent dissociation of hydrogen-rich radical peptide cations upon vacuum UV photoexcitation.

James A Madsen1, Ryan R Cheng, Tamer S Kaoud, Kevin N Dalby, Dmitrii E Makarov, Jennifer S Brodbelt.   

Abstract

Here, 193 nm vacuum ultraviolet photodissociation (VUVPD) was used to investigate the fragmentation of hydrogen-rich radical peptide cations generated by electron transfer reactions. VUVPD offers new insight into the factors that drive radical- and photon-directed processes. The location of a basic Arg site influences photon-activated C(α)-C(O) bond cleavages of singly charged peptide radical cations, an outcome attributed to the initial conformation of the peptide as supported by molecular dynamics simulated annealing and the population of excited states upon UV excitation. This hybrid ETD/VUVPD method was employed to identify phosphorylation sites of the kinase domain of human TRPM7/ChaK1.
Copyright © 2012 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2012        PMID: 22431222      PMCID: PMC4136645          DOI: 10.1002/chem.201103534

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  40 in total

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3.  Surface-Induced Dissociation: An Effective Method for Characterization of Protein Quaternary Structure.

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8.  Implementation of Activated Ion Electron Transfer Dissociation on a Quadrupole-Orbitrap-Linear Ion Trap Hybrid Mass Spectrometer.

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Review 9.  Ion Activation Methods for Peptides and Proteins.

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10.  193 nm Ultraviolet Photodissociation Mass Spectrometry for Phosphopeptide Characterization in the Positive and Negative Ion Modes.

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