Literature DB >> 24481009

Photodissociation mass spectrometry: new tools for characterization of biological molecules.

Jennifer S Brodbelt1.   

Abstract

Photodissociation mass spectrometry combines the ability to activate and fragment ions using photons with the sensitive detection of the resulting product ions by mass spectrometry. This combination affords a versatile tool for characterization of biological molecules. The scope and breadth of photodissociation mass spectrometry have increased substantially over the past decade as new research groups have entered the field and developed a number of innovative applications that illustrate the ability of photodissociation to produce rich fragmentation patterns, to cleave bonds selectively, and to target specific molecules based on incorporation of chromophores. This review focuses on many of the key developments in photodissociation mass spectrometry over the past decade with a particular emphasis on its applications to biological molecules.

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Year:  2014        PMID: 24481009      PMCID: PMC3966968          DOI: 10.1039/c3cs60444f

Source DB:  PubMed          Journal:  Chem Soc Rev        ISSN: 0306-0012            Impact factor:   54.564


  166 in total

1.  De novo sequencing of tryptic peptides derived from Deinococcus radiodurans ribosomal proteins using 157 nm photodissociation MALDI TOF/TOF mass spectrometry.

Authors:  Liangyi Zhang; James P Reilly
Journal:  J Proteome Res       Date:  2010-06-04       Impact factor: 4.466

2.  Structures of alpha-type ions formed in the 157 nm photodissociation of singly-charged peptide ions.

Authors:  Liangyi Zhang; Weidong Cui; Matthew S Thompson; James P Reilly
Journal:  J Am Soc Mass Spectrom       Date:  2006-07-18       Impact factor: 3.109

3.  Ion spectroscopy: where did it come from; where is it now; and where is it going?

Authors:  Tomas Baer; Robert C Dunbar
Journal:  J Am Soc Mass Spectrom       Date:  2010-02-01       Impact factor: 3.109

4.  Reduction in database search space by utilization of amino acid composition information from electron transfer dissociation and higher-energy collisional dissociation mass spectra.

Authors:  Thomas A Hansen; Fedor Kryuchkov; Frank Kjeldsen
Journal:  Anal Chem       Date:  2012-07-09       Impact factor: 6.986

5.  Revealing the quaternary structure of a heterogeneous noncovalent protein complex through surface-induced dissociation.

Authors:  Anne E Blackwell; Eric D Dodds; Vahe Bandarian; Vicki H Wysocki
Journal:  Anal Chem       Date:  2011-03-21       Impact factor: 6.986

6.  Systematic comparison of ultraviolet photodissociation and electron transfer dissociation for peptide anion characterization.

Authors:  Jared B Shaw; James A Madsen; Hua Xu; Jennifer S Brodbelt
Journal:  J Am Soc Mass Spectrom       Date:  2012-08-16       Impact factor: 3.109

7.  Fourier transform ion cyclotron resonance mass spectrometry for the analysis of small ubiquitin-like modifier (SUMO) modification: identification of lysines in RanBP2 and SUMO targeted for modification during the E3 autoSUMOylation reaction.

Authors:  Helen J Cooper; Michael H Tatham; Ellis Jaffray; John K Heath; TuKiet T Lam; Alan G Marshall; Ronald T Hay
Journal:  Anal Chem       Date:  2005-10-01       Impact factor: 6.986

8.  Ultraviolet photodissociation of chromophore-labeled oligosaccharides via reductive amination and hydrazide conjugation.

Authors:  Byoung Joon Ko; Jennifer S Brodbelt
Journal:  J Mass Spectrom       Date:  2011-04       Impact factor: 1.982

9.  Infrared multiphoton dissociation of peptide cations in a dual pressure linear ion trap mass spectrometer.

Authors:  Myles W Gardner; Suncerae I Smith; Aaron R Ledvina; James A Madsen; Joshua J Coon; Jae C Schwartz; George C Stafford; Jennifer S Brodbelt
Journal:  Anal Chem       Date:  2009-10-01       Impact factor: 6.986

10.  Ultraviolet photodissociation at 355 nm of fluorescently labeled oligosaccharides.

Authors:  Jeffrey J Wilson; Jennifer S Brodbelt
Journal:  Anal Chem       Date:  2008-05-28       Impact factor: 6.986

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  105 in total

1.  Standard Proteoforms and Their Complexes for Native Mass Spectrometry.

Authors:  Luis F Schachner; Ashley N Ives; John P McGee; Rafael D Melani; Jared O Kafader; Philip D Compton; Steven M Patrie; Neil L Kelleher
Journal:  J Am Soc Mass Spectrom       Date:  2019-04-08       Impact factor: 3.109

2.  Structural Characterization of Glycosaminoglycan Carbohydrates Using Ultraviolet Photodissociation.

Authors:  Dustin R Klein; Franklin E Leach; I Jonathan Amster; Jennifer S Brodbelt
Journal:  Anal Chem       Date:  2019-04-11       Impact factor: 6.986

3.  VUV Photodissociation Induced by a Deuterium Lamp in an Ion Trap.

Authors:  Stefanie Ickert; Sebastian Beck; Michael W Linscheid; Jens Riedel
Journal:  J Am Soc Mass Spectrom       Date:  2019-08-19       Impact factor: 3.109

4.  Directed-Backbone Dissociation Following Bond-Specific Carbon-Sulfur UVPD at 213 nm.

Authors:  Lance E Talbert; Ryan R Julian
Journal:  J Am Soc Mass Spectrom       Date:  2018-04-05       Impact factor: 3.109

5.  Mapping RNAPII CTD Phosphorylation Reveals That the Identity and Modification of Seventh Heptad Residues Direct Tyr1 Phosphorylation.

Authors:  Nathaniel T Burkholder; Sarah N Sipe; Edwin E Escobar; Mukeshkumar Venkatramani; Seema Irani; Wanjie Yang; Haoyi Wu; Wendy M Matthews; Jennifer S Brodbelt; Yan Zhang
Journal:  ACS Chem Biol       Date:  2019-10-07       Impact factor: 5.100

6.  Identification of Double Bond Position Isomers in Unsaturated Lipids by m-CPBA Epoxidation and Mass Spectrometry Fragmentation.

Authors:  Yu Feng; Bingming Chen; Qinying Yu; Lingjun Li
Journal:  Anal Chem       Date:  2019-01-17       Impact factor: 6.986

Review 7.  Mass Spectrometry Approaches to Glycomic and Glycoproteomic Analyses.

Authors:  L Renee Ruhaak; Gege Xu; Qiongyu Li; Elisha Goonatilleke; Carlito B Lebrilla
Journal:  Chem Rev       Date:  2018-03-19       Impact factor: 60.622

8.  Free-Radical-Mediated Glycan Isomer Differentiation.

Authors:  Rayan Murtada; Kimberly Fabijanczuk; Kaylee Gaspar; Xueming Dong; Kawthar Zeyad Alzarieni; Kimberly Calix; Edgar Manriquez; Rose Mery Bakestani; Hilkka I Kenttämaa; Jinshan Gao
Journal:  Anal Chem       Date:  2020-09-28       Impact factor: 6.986

9.  Characterization of Lipid A Variants by Energy-Resolved Mass Spectrometry: Impact of Acyl Chains.

Authors:  Christopher M Crittenden; Lucas D Akin; Lindsay J Morrison; M Stephen Trent; Jennifer S Brodbelt
Journal:  J Am Soc Mass Spectrom       Date:  2016-12-13       Impact factor: 3.109

10.  Shotgun Analysis of Rough-Type Lipopolysaccharides Using Ultraviolet Photodissociation Mass Spectrometry.

Authors:  Dustin R Klein; Dustin D Holden; Jennifer S Brodbelt
Journal:  Anal Chem       Date:  2015-12-10       Impact factor: 6.986

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