Literature DB >> 22427720

Metabolic modeling of Chlamydomonas reinhardtii: energy requirements for photoautotrophic growth and maintenance.

Anna M J Kliphuis1, Anne J Klok, Dirk E Martens, Packo P Lamers, Marcel Janssen, René H Wijffels.   

Abstract

In this study, a metabolic network describing the primary metabolism of Chlamydomonas reinhardtii was constructed. By performing chemostat experiments at different growth rates, energy parameters for maintenance and biomass formation were determined. The chemostats were run at low irradiances resulting in a high biomass yield on light of 1.25 g  mol(-1). The ATP requirement for biomass formation from biopolymers (K(x)) was determined to be 109 mmol g(-1) (18.9 mol mol(-1)) and the maintenance requirement (m(ATP)) was determined to be 2.85 mmol g(-1) h(-1). With these energy requirements included in the metabolic network, the network accurately describes the primary metabolism of C. reinhardtii and can be used for modeling of C. reinhardtii growth and metabolism. Simulations confirmed that cultivating microalgae at low growth rates is unfavorable because of the high maintenance requirements which result in low biomass yields. At high light supply rates, biomass yields will decrease due to light saturation effects. Thus, to optimize biomass yield on light energy in photobioreactors, an optimum between low and high light supply rates should be found. These simulations show that metabolic flux analysis can be used as a tool to gain insight into the metabolism of algae and ultimately can be used for the maximization of algal biomass and product yield. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s10811-011-9674-3) contains supplementary material, which is available to authorized users.

Entities:  

Year:  2011        PMID: 22427720      PMCID: PMC3289792          DOI: 10.1007/s10811-011-9674-3

Source DB:  PubMed          Journal:  J Appl Phycol        ISSN: 0921-8971            Impact factor:   3.215


  40 in total

1.  Energetics and carbon metabolism during growth of microalgal cells under photoautotrophic, mixotrophic and cyclic light-autotrophic/dark-heterotrophic conditions.

Authors: 
Journal:  Biochem Eng J       Date:  2000-10-01       Impact factor: 3.978

Review 2.  Micro-algae as a source of protein.

Authors:  E W Becker
Journal:  Biotechnol Adv       Date:  2006-11-23       Impact factor: 14.227

3.  The maintenance energy of bacteria in growing cultures.

Authors:  S J Pirt
Journal:  Proc R Soc Lond B Biol Sci       Date:  1965-10-12

4.  Fluorometric determination of DNA and RNA in Chlamydomonas using ethidium bromide.

Authors:  O Valle; T Lien; G Knutsen
Journal:  J Biochem Biophys Methods       Date:  1981-06

5.  Carotenoid and fatty acid metabolism in light-stressed Dunaliella salina.

Authors:  Packo P Lamers; Carlien C W van de Laak; Petrouchka S Kaasenbrood; Jeroen Lorier; Marcel Janssen; Ric C H De Vos; Raoul J Bino; René H Wijffels
Journal:  Biotechnol Bioeng       Date:  2010-07-01       Impact factor: 4.530

6.  Minimal reaction sets for Escherichia coli metabolism under different growth requirements and uptake environments.

Authors:  A P Burgard; S Vaidyaraman; C D Maranas
Journal:  Biotechnol Prog       Date:  2001 Sep-Oct

7.  Identification of a metabolic network structure representative of Arthrospira (spirulina) platensis metabolism.

Authors:  Guillaume Cogne; J-B Gros; C-G Dussap
Journal:  Biotechnol Bioeng       Date:  2003-12-20       Impact factor: 4.530

8.  Modeling Neisseria meningitidis B metabolism at different specific growth rates.

Authors:  Gino J E Baart; Marieke Willemsen; Elnaz Khatami; Alex de Haan; Bert Zomer; E Coen Beuvery; Johannes Tramper; Dirk E Martens
Journal:  Biotechnol Bioeng       Date:  2008-12-01       Impact factor: 4.530

9.  The Chlamydomonas genome reveals the evolution of key animal and plant functions.

Authors:  Sabeeha S Merchant; Simon E Prochnik; Olivier Vallon; Elizabeth H Harris; Steven J Karpowicz; George B Witman; Astrid Terry; Asaf Salamov; Lillian K Fritz-Laylin; Laurence Maréchal-Drouard; Wallace F Marshall; Liang-Hu Qu; David R Nelson; Anton A Sanderfoot; Martin H Spalding; Vladimir V Kapitonov; Qinghu Ren; Patrick Ferris; Erika Lindquist; Harris Shapiro; Susan M Lucas; Jane Grimwood; Jeremy Schmutz; Pierre Cardol; Heriberto Cerutti; Guillaume Chanfreau; Chun-Long Chen; Valérie Cognat; Martin T Croft; Rachel Dent; Susan Dutcher; Emilio Fernández; Hideya Fukuzawa; David González-Ballester; Diego González-Halphen; Armin Hallmann; Marc Hanikenne; Michael Hippler; William Inwood; Kamel Jabbari; Ming Kalanon; Richard Kuras; Paul A Lefebvre; Stéphane D Lemaire; Alexey V Lobanov; Martin Lohr; Andrea Manuell; Iris Meier; Laurens Mets; Maria Mittag; Telsa Mittelmeier; James V Moroney; Jeffrey Moseley; Carolyn Napoli; Aurora M Nedelcu; Krishna Niyogi; Sergey V Novoselov; Ian T Paulsen; Greg Pazour; Saul Purton; Jean-Philippe Ral; Diego Mauricio Riaño-Pachón; Wayne Riekhof; Linda Rymarquis; Michael Schroda; David Stern; James Umen; Robert Willows; Nedra Wilson; Sara Lana Zimmer; Jens Allmer; Janneke Balk; Katerina Bisova; Chong-Jian Chen; Marek Elias; Karla Gendler; Charles Hauser; Mary Rose Lamb; Heidi Ledford; Joanne C Long; Jun Minagawa; M Dudley Page; Junmin Pan; Wirulda Pootakham; Sanja Roje; Annkatrin Rose; Eric Stahlberg; Aimee M Terauchi; Pinfen Yang; Steven Ball; Chris Bowler; Carol L Dieckmann; Vadim N Gladyshev; Pamela Green; Richard Jorgensen; Stephen Mayfield; Bernd Mueller-Roeber; Sathish Rajamani; Richard T Sayre; Peter Brokstein; Inna Dubchak; David Goodstein; Leila Hornick; Y Wayne Huang; Jinal Jhaveri; Yigong Luo; Diego Martínez; Wing Chi Abby Ngau; Bobby Otillar; Alexander Poliakov; Aaron Porter; Lukasz Szajkowski; Gregory Werner; Kemin Zhou; Igor V Grigoriev; Daniel S Rokhsar; Arthur R Grossman
Journal:  Science       Date:  2007-10-12       Impact factor: 47.728

10.  The selectivity of milking of Dunaliella salina.

Authors:  Dorinde M M Kleinegris; Marcel Janssen; Willem A Brandenburg; René H Wijffels
Journal:  Mar Biotechnol (NY)       Date:  2009-05-28       Impact factor: 3.619

View more
  28 in total

1.  Flux balance analysis of Chlorella sp. FC2 IITG under photoautotrophic and heterotrophic growth conditions.

Authors:  Muthusivaramapandian Muthuraj; Basavaraj Palabhanvi; Shamik Misra; Vikram Kumar; Kumaran Sivalingavasu; Debasish Das
Journal:  Photosynth Res       Date:  2013-10-19       Impact factor: 3.573

2.  Analysis of fatty acid content and composition in microalgae.

Authors:  Guido Breuer; Wendy A C Evers; Jeroen H de Vree; Dorinde M M Kleinegris; Dirk E Martens; René H Wijffels; Packo P Lamers
Journal:  J Vis Exp       Date:  2013-10-01       Impact factor: 1.355

3.  Rapid Colonization of Uranium Mining-Impacted Waters, the Biodiversity of Successful Lineages of Phytoplankton Extremophiles.

Authors:  Beatriz Baselga-Cervera; Camino García-Balboa; Héctor M Díaz-Alejo; Eduardo Costas; Victoria López-Rodas
Journal:  Microb Ecol       Date:  2019-08-29       Impact factor: 4.552

4.  Impaired Mitochondrial Transcription Termination Disrupts the Stromal Redox Poise in Chlamydomonas.

Authors:  Andreas Uhmeyer; Michela Cecchin; Matteo Ballottari; Lutz Wobbe
Journal:  Plant Physiol       Date:  2017-05-12       Impact factor: 8.340

5.  A refined genome-scale reconstruction of Chlamydomonas metabolism provides a platform for systems-level analyses.

Authors:  Saheed Imam; Sascha Schäuble; Jacob Valenzuela; Adrián López García de Lomana; Warren Carter; Nathan D Price; Nitin S Baliga
Journal:  Plant J       Date:  2015-11-30       Impact factor: 6.417

6.  Quantifying the effects of light intensity on bioproduction and maintenance energy during photosynthetic growth of Rhodobacter sphaeroides.

Authors:  Saheed Imam; Colin M Fitzgerald; Emily M Cook; Timothy J Donohue; Daniel R Noguera
Journal:  Photosynth Res       Date:  2014-11-27       Impact factor: 3.573

7.  Mechanisms that increase the growth efficiency of diatoms in low light.

Authors:  Nerissa L Fisher; Kimberly H Halsey
Journal:  Photosynth Res       Date:  2016-06-16       Impact factor: 3.573

Review 8.  Establishing Chlamydomonas reinhardtii as an industrial biotechnology host.

Authors:  Mark A Scaife; Ginnie T D T Nguyen; Juan Rico; Devinn Lambert; Katherine E Helliwell; Alison G Smith
Journal:  Plant J       Date:  2015-03-08       Impact factor: 6.417

9.  Integration of a constraint-based metabolic model of Brassica napus developing seeds with (13)C-metabolic flux analysis.

Authors:  Jordan O Hay; Hai Shi; Nicolas Heinzel; Inga Hebbelmann; Hardy Rolletschek; Jorg Schwender
Journal:  Front Plant Sci       Date:  2014-12-19       Impact factor: 5.753

10.  Superior triacylglycerol (TAG) accumulation in starchless mutants of Scenedesmus obliquus: (II) evaluation of TAG yield and productivity in controlled photobioreactors.

Authors:  Guido Breuer; Lenny de Jaeger; Valentin P G Artus; Dirk E Martens; Jan Springer; René B Draaisma; Gerrit Eggink; René H Wijffels; Packo P Lamers
Journal:  Biotechnol Biofuels       Date:  2014-05-12       Impact factor: 6.040

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.