Literature DB >> 22424973

Discovery of HIV fusion inhibitors targeting gp41 using a comprehensive α-helix mimetic library.

Landon R Whitby1, Kristopher E Boyle, Lifeng Cai, Xiaoqian Yu, Miriam Gochin, Dale L Boger.   

Abstract

The evaluation of a comprehensive α-helix mimetic library for binding the gp41 NHR hydrophobic pocket recognizing an intramolecular CHR α-helix provided a detailed depiction of structural features required for binding and led to the discovery of small molecule inhibitors (K(i) 0.6-1.3 μM) that not only match or exceed the potency of those disclosed over the past decade, but that also exhibit effective activity in a cell-cell fusion assay (IC(50) 5-8 μM).
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22424973      PMCID: PMC3321071          DOI: 10.1016/j.bmcl.2012.02.062

Source DB:  PubMed          Journal:  Bioorg Med Chem Lett        ISSN: 0960-894X            Impact factor:   2.823


  39 in total

1.  Identification of a novel class of small-molecule antiangiogenic agents through the screening of combinatorial libraries which function by inhibiting the binding and localization of proteinase MMP2 to integrin alpha(V)beta(3).

Authors:  D L Boger; J Goldberg; S Silletti; T Kessler; D A Cheresh
Journal:  J Am Chem Soc       Date:  2001-02-21       Impact factor: 15.419

2.  Design and application of an alpha-helix-mimetic scaffold based on an oligoamide-foldamer strategy: antagonism of the Bak BH3/Bcl-xL complex.

Authors:  Justin T Ernst; Jorge Becerril; Hyung Soon Park; Hang Yin; Andrew D Hamilton
Journal:  Angew Chem Int Ed Engl       Date:  2003-02-03       Impact factor: 15.336

3.  Design of a protein surface antagonist based on alpha-helix mimicry: inhibition of gp41 assembly and viral fusion.

Authors:  Justin T Ernst; Olaf Kutzki; Asim K Debnath; Shibo Jiang; Hong Lu; Andrew D Hamilton
Journal:  Angew Chem Int Ed Engl       Date:  2002-01-18       Impact factor: 15.336

Review 4.  Solution-phase combinatorial libraries: modulating cellular signaling by targeting protein-protein or protein-DNA interactions.

Authors:  Dale L Boger; Joel Desharnais; Kevin Capps
Journal:  Angew Chem Int Ed Engl       Date:  2003-09-15       Impact factor: 15.336

5.  A metallopeptide assembly of the HIV-1 gp41 coiled coil is an ideal receptor in fluorescence detection of ligand binding.

Authors:  Miriam Gochin; Rodney Kiplin Guy; Martin A Case
Journal:  Angew Chem Int Ed Engl       Date:  2003-11-10       Impact factor: 15.336

6.  Erythropoietin mimetics derived from solution phase combinatorial libraries.

Authors:  Joel Goldberg; Qing Jin; Yves Ambroise; Shigeki Satoh; Joel Desharnais; Kevin Capps; Dale L Boger
Journal:  J Am Chem Soc       Date:  2002-01-30       Impact factor: 15.419

7.  Development of indole compounds as small molecule fusion inhibitors targeting HIV-1 glycoprotein-41.

Authors:  Guangyan Zhou; Dong Wu; Beth Snyder; Roger G Ptak; Harmeet Kaur; Miriam Gochin
Journal:  J Med Chem       Date:  2011-10-03       Impact factor: 7.446

8.  Small-molecule antagonists of Myc/Max dimerization inhibit Myc-induced transformation of chicken embryo fibroblasts.

Authors:  Thorsten Berg; Steven B Cohen; Joel Desharnais; Corinna Sonderegger; Daniel J Maslyar; Joel Goldberg; Dale L Boger; Peter K Vogt
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-12       Impact factor: 11.205

9.  Inhibitors of cell migration that inhibit intracellular paxillin/alpha4 binding: a well-documented use of positional scanning libraries.

Authors:  Yves Ambroise; Brian Yaspan; Mark H Ginsberg; Dale L Boger
Journal:  Chem Biol       Date:  2002-11

10.  Disruption of matrix metalloproteinase 2 binding to integrin alpha vbeta 3 by an organic molecule inhibits angiogenesis and tumor growth in vivo.

Authors:  S Silletti; T Kessler; J Goldberg; D L Boger; D A Cheresh
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-02       Impact factor: 11.205

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  14 in total

Review 1.  Inhibition of α-helix-mediated protein-protein interactions using designed molecules.

Authors:  Valeria Azzarito; Kérya Long; Natasha S Murphy; Andrew J Wilson
Journal:  Nat Chem       Date:  2013-03       Impact factor: 24.427

2.  Biophysical studies of HIV-1 glycoprotein-41 interactions with peptides and small molecules - Effect of lipids and detergents.

Authors:  Guangyan Zhou; Shidong Chu; Aditya Kohli; Francis C Szoka; Miriam Gochin
Journal:  Biochim Biophys Acta Gen Subj       Date:  2020-09-02       Impact factor: 3.770

3.  Enhanced potency of bivalent small molecule gp41 inhibitors.

Authors:  Vladimir Sofiyev; Hardeep Kaur; Beth A Snyder; Priscilla A Hogan; Roger G Ptak; Peter Hwang; Miriam Gochin
Journal:  Bioorg Med Chem       Date:  2016-11-19       Impact factor: 3.641

4.  Design and characterization of swapped-domain constructs of HIV-1 glycoprotein-41 as receptors for drug discovery.

Authors:  Joseph D Walsh; Shidong Chu; Shao-Qing Zhang; Miriam Gochin
Journal:  Protein Eng Des Sel       Date:  2015-04       Impact factor: 1.650

5.  Discovery libraries targeting the major enzyme classes: the serine hydrolases.

Authors:  Katerina Otrubova; Venkat Srinivasan; Dale L Boger
Journal:  Bioorg Med Chem Lett       Date:  2014-06-27       Impact factor: 2.823

6.  NMR-assisted computational studies of peptidomimetic inhibitors bound in the hydrophobic pocket of HIV-1 glycoprotein 41.

Authors:  Miriam Gochin; Landon R Whitby; Aaron H Phillips; Dale L Boger
Journal:  J Comput Aided Mol Des       Date:  2013-07-27       Impact factor: 3.686

7.  Identification of fragments targeting an alternative pocket on HIV-1 gp41 by NMR screening and similarity searching.

Authors:  Shidong Chu; Miriam Gochin
Journal:  Bioorg Med Chem Lett       Date:  2013-07-22       Impact factor: 2.823

8.  Comprehensive peptidomimetic libraries targeting protein-protein interactions.

Authors:  Landon R Whitby; Dale L Boger
Journal:  Acc Chem Res       Date:  2012-07-16       Impact factor: 22.384

Review 9.  Approaches for identification of HIV-1 entry inhibitors targeting gp41 pocket.

Authors:  Fei Yu; Lu Lu; Lanying Du; Xiaojie Zhu; Asim K Debnath; Shibo Jiang
Journal:  Viruses       Date:  2013-01-11       Impact factor: 5.048

10.  Computer-Aided Approaches for Targeting HIVgp41.

Authors:  William J Allen; Robert C Rizzo
Journal:  Biology (Basel)       Date:  2012-08-20
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