Literature DB >> 22419972

A skeleton model for the network of cyclin-dependent kinases driving the mammalian cell cycle.

Claude Gérard1, Albert Goldbeter.   

Abstract

We previously proposed a detailed, 39-variable model for the network of cyclin-dependent kinases (Cdks) that controls progression along the successive phases of the mammalian cell cycle. Here, we propose a skeleton, 5-variable model for the Cdk network that can be seen as the backbone of the more detailed model for the mammalian cell cycle. In the presence of sufficient amounts of growth factor, the skeleton model also passes from a stable steady state to sustained oscillations of the various cyclin/Cdk complexes. This transition corresponds to the switch from quiescence to cell proliferation. Sequential activation of the cyclin/Cdk complexes allows the ordered progression along the G1, S, G2 and M phases of the cell cycle. The 5-variable model can also account for the existence of a restriction point in G1, and for endoreplication. Like the detailed model, it contains multiple oscillatory circuits and can display complex oscillatory behaviour such as quasi-periodic oscillations and chaos. We compare the dynamical properties of the skeleton model with those of the more detailed model for the mammalian cell cycle.

Entities:  

Keywords:  cell cycle; model; oscillations; systems biology

Year:  2010        PMID: 22419972      PMCID: PMC3262247          DOI: 10.1098/rsfs.2010.0008

Source DB:  PubMed          Journal:  Interface Focus        ISSN: 2042-8898            Impact factor:   3.906


  21 in total

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Journal:  Bioinformatics       Date:  2004-07-10       Impact factor: 6.937

5.  From simple to complex patterns of oscillatory behavior in a model for the mammalian cell cycle containing multiple oscillatory circuits.

Authors:  Claude Gérard; Albert Goldbeter
Journal:  Chaos       Date:  2010-12       Impact factor: 3.642

6.  Systems-level dissection of the cell-cycle oscillator: bypassing positive feedback produces damped oscillations.

Authors:  Joseph R Pomerening; Sun Young Kim; James E Ferrell
Journal:  Cell       Date:  2005-08-26       Impact factor: 41.582

7.  A minimal cascade model for the mitotic oscillator involving cyclin and cdc2 kinase.

Authors:  A Goldbeter
Journal:  Proc Natl Acad Sci U S A       Date:  1991-10-15       Impact factor: 11.205

8.  A restriction point for control of normal animal cell proliferation.

Authors:  A B Pardee
Journal:  Proc Natl Acad Sci U S A       Date:  1974-04       Impact factor: 11.205

9.  Cyclins E1 and E2 are required for endoreplication in placental trophoblast giant cells.

Authors:  Tiziana Parisi; Andreas R Beck; Nathalie Rougier; Tom McNeil; Linda Lucian; Zena Werb; Bruno Amati
Journal:  EMBO J       Date:  2003-09-15       Impact factor: 11.598

10.  D-type cyclin-dependent kinase activity in mammalian cells.

Authors:  H Matsushime; D E Quelle; S A Shurtleff; M Shibuya; C J Sherr; J Y Kato
Journal:  Mol Cell Biol       Date:  1994-03       Impact factor: 4.272

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  16 in total

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5.  "The Octet": Eight Protein Kinases that Control Mammalian DNA Replication.

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Journal:  Front Physiol       Date:  2012-09-26       Impact factor: 4.566

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Journal:  Interface Focus       Date:  2014-06-06       Impact factor: 3.906

8.  From quiescence to proliferation: Cdk oscillations drive the mammalian cell cycle.

Authors:  Claude Gérard; Albert Goldbeter
Journal:  Front Physiol       Date:  2012-11-02       Impact factor: 4.566

9.  MicroRNA-mediated regulation in biological systems with oscillatory behavior.

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10.  Exponentially Fitted Two-Derivative Runge-Kutta Methods for Simulation of Oscillatory Genetic Regulatory Systems.

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Journal:  Comput Math Methods Med       Date:  2015-10-13       Impact factor: 2.238

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