Literature DB >> 22419077

Gene overexpression: uses, mechanisms, and interpretation.

Gregory Prelich1.   

Abstract

The classical genetic approach for exploring biological pathways typically begins by identifying mutations that cause a phenotype of interest. Overexpression or misexpression of a wild-type gene product, however, can also cause mutant phenotypes, providing geneticists with an alternative yet powerful tool to identify pathway components that might remain undetected using traditional loss-of-function analysis. This review describes the history of overexpression, the mechanisms that are responsible for overexpression phenotypes, tests that begin to distinguish between those mechanisms, the varied ways in which overexpression is used, the methods and reagents available in several organisms, and the relevance of overexpression to human disease.

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Year:  2012        PMID: 22419077      PMCID: PMC3296252          DOI: 10.1534/genetics.111.136911

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  114 in total

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Authors:  G Prelich
Journal:  Trends Genet       Date:  1999-07       Impact factor: 11.639

Review 2.  The gene balance hypothesis: from classical genetics to modern genomics.

Authors:  James A Birchler; Reiner A Veitia
Journal:  Plant Cell       Date:  2007-02-09       Impact factor: 11.277

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Journal:  Cell       Date:  1991-11-15       Impact factor: 41.582

Review 4.  Overexpression analysis of plant transcription factors.

Authors:  James Z Zhang
Journal:  Curr Opin Plant Biol       Date:  2003-10       Impact factor: 7.834

Review 5.  Propagation and expression of cloned genes in yeast: 2-microns circle-based vectors.

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Journal:  Methods Enzymol       Date:  1990       Impact factor: 1.600

6.  Analysis of the galactose signal transduction pathway in Saccharomyces cerevisiae: interaction between Gal3p and Gal80p.

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Journal:  Mol Cell Biol       Date:  1996-05       Impact factor: 4.272

7.  Identification of the sequences in HMG-CoA reductase required for karmellae assembly.

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Journal:  Mol Biol Cell       Date:  1995-11       Impact factor: 4.138

8.  Targeted selection of recombinant clones through gene dosage effects.

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Journal:  Proc Natl Acad Sci U S A       Date:  1983-11       Impact factor: 11.205

9.  Activation of the estrogen receptor through phosphorylation by mitogen-activated protein kinase.

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Journal:  Science       Date:  1995-12-01       Impact factor: 47.728

10.  Increased amounts of HMG-CoA reductase induce "karmellae": a proliferation of stacked membrane pairs surrounding the yeast nucleus.

Authors:  R Wright; M Basson; L D'Ari; J Rine
Journal:  J Cell Biol       Date:  1988-07       Impact factor: 10.539

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  161 in total

Review 1.  The New State of the Art: Cas9 for Gene Activation and Repression.

Authors:  Marie F La Russa; Lei S Qi
Journal:  Mol Cell Biol       Date:  2015-09-14       Impact factor: 4.272

2.  Mapping a diversity of genetic interactions in yeast.

Authors:  Jolanda van Leeuwen; Charles Boone; Brenda J Andrews
Journal:  Curr Opin Syst Biol       Date:  2017-08-12

3.  Inducible protein traps with dominant phenotypes for functional analysis of the Drosophila genome.

Authors:  Swetha Singari; Naureen Javeed; Nicholas J Tardi; Suresh Marada; Jeff C Carlson; Steven Kirk; Judith M Thorn; Kevin A Edwards
Journal:  Genetics       Date:  2013-10-30       Impact factor: 4.562

4.  CsrA (BB0184) is not involved in activation of the RpoN-RpoS regulatory pathway in Borrelia burgdorferi.

Authors:  Zhiming Ouyang; Jianli Zhou; Michael V Norgard
Journal:  Infect Immun       Date:  2014-01-22       Impact factor: 3.441

5.  Live imaging of endogenous PSD-95 using ENABLED: a conditional strategy to fluorescently label endogenous proteins.

Authors:  Dale A Fortin; Shane E Tillo; Guang Yang; Jong-Cheol Rah; Joshua B Melander; Suxia Bai; Omar Soler-Cedeño; Maozhen Qin; Boris V Zemelman; Caiying Guo; Tianyi Mao; Haining Zhong
Journal:  J Neurosci       Date:  2014-12-10       Impact factor: 6.167

6.  RMut: R package for a Boolean sensitivity analysis against various types of mutations.

Authors:  Hung-Cuong Trinh; Yung-Keun Kwon
Journal:  PLoS One       Date:  2019-03-19       Impact factor: 3.240

Review 7.  Generation of extracellular morphogen gradients: the case for diffusion.

Authors:  Kristina S Stapornwongkul; Jean-Paul Vincent
Journal:  Nat Rev Genet       Date:  2021-03-25       Impact factor: 53.242

8.  TDP-43 and PINK1 mediate CHCHD10S59L mutation-induced defects in Drosophila and in vitro.

Authors:  Minwoo Baek; Yun-Jeong Choe; Sylvie Bannwarth; JiHye Kim; Swati Maitra; Gerald W Dorn; J Paul Taylor; Veronique Paquis-Flucklinger; Nam Chul Kim
Journal:  Nat Commun       Date:  2021-03-26       Impact factor: 14.919

9.  Arabidopsis glutamate:glyoxylate aminotransferase 1 (Ler) mutants generated by CRISPR/Cas9 and their characteristics.

Authors:  Yaping Liang; Xiuying Zeng; Xinxiang Peng; Xuewen Hou
Journal:  Transgenic Res       Date:  2018-02-01       Impact factor: 2.788

10.  Establishment of an in vitro regeneration system and genetic transformation of the Tunisian 'Maltese half-blood' (Citrus sinensis): an agro-economically important variety.

Authors:  Rahma Jardak; Hatem Boubakri; Hassene Zemni; Samia Gandoura; Samiha Mejri; Ahmed Mliki; Abdelwahed Ghorbel
Journal:  3 Biotech       Date:  2020-02-06       Impact factor: 2.406

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