Literature DB >> 22412454

Dichloridobis(thio-urea-κS)nickel(II).

Hafid Zouihri1.   

Abstract

The title complex, [NiCl(2)(CH(4)N(2)S)(2)], has been synthesized from the previously reported (diamino-methyl-idene)sulfonium chloride-thio-urea (3/2) salt [Zouihri (2012b ▶). Acta Cryst. E68, o257]. The Ni(II) ion is coordinated in a distorted tetra-hedral geometry by two mol-ecules of thio-urea [Ni-S = 2.3079 (7) and 2.3177 (6) Å] and two chloride anions [Ni-Cl = 2.2516 (7) and 2.2726 (7) Å]. The bond angles at the Ni atom lie between 96.69 (2) and 115.40 (3)°, while the dihedral angle between the mean planes of the two thio-urea ligands is 6.36 (15)°. The crystal structure is characterized by intra- and inter-molecular N-H⋯Cl hydrogen bonds, which lead to the formation of two-dimensional networks lying parallel to the ab plane. The networks are linked via classical N-H⋯Cl and N-H⋯S hydrogen bonds, forming a three-dimensional arrangement.

Entities:  

Year:  2012        PMID: 22412454      PMCID: PMC3297264          DOI: 10.1107/S1600536812006174

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis and the crystal structure of (diamino­methyl­idene)sulfonium chloride thio­urea (3/2), see: Zouihri (2012b ▶). For related structures, see: Ambujam et al. (2007 ▶); Zouihri (2012a ▶). For related literature on the coordination complexes of NiII salts with thio­urea, see: Asif et al. (2010 ▶).

Experimental

Crystal data

[NiCl2(CH4N2S)2] M = 281.85 Monoclinic, a = 8.1578 (3) Å b = 11.8183 (5) Å c = 10.8526 (6) Å β = 103.869 (2)° V = 1015.81 (8) Å3 Z = 4 Mo Kα radiation μ = 2.79 mm−1 T = 100 K 0.42 × 0.37 × 0.17 mm

Data collection

Bruker APEXII CCD detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2004 ▶) T min = 0.322, T max = 0.622 4883 measured reflections 1695 independent reflections 1678 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.017 wR(F 2) = 0.045 S = 1.08 1695 reflections 132 parameters 10 restraints All H-atom parameters refined Δρmax = 0.25 e Å−3 Δρmin = −0.15 e Å−3 Absolute structure: Flack (1983 ▶), 745 Friedel pairs Flack parameter: 0.069 (10) Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812006174/fj2518sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812006174/fj2518Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[NiCl2(CH4N2S)2]F(000) = 568
Mr = 281.85Dx = 1.843 Mg m3
Monoclinic, CcMo Kα radiation, λ = 0.71073 Å
Hall symbol: C -2ycCell parameters from 289 reflections
a = 8.1578 (3) Åθ = 1.8–26.7°
b = 11.8183 (5) ŵ = 2.79 mm1
c = 10.8526 (6) ÅT = 100 K
β = 103.869 (2)°Prism, colourless
V = 1015.81 (8) Å30.42 × 0.37 × 0.17 mm
Z = 4
Bruker APEXII CCD detector diffractometer1695 independent reflections
Radiation source: fine-focus sealed tube1678 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.022
ω and φ scansθmax = 25.5°, θmin = 3.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 2004)h = −9→8
Tmin = 0.322, Tmax = 0.622k = −14→14
4883 measured reflectionsl = −13→13
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.017All H-atom parameters refined
wR(F2) = 0.045w = 1/[σ2(Fo2) + (0.0205P)2 + 0.1021P] where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max = 0.002
1695 reflectionsΔρmax = 0.25 e Å3
132 parametersΔρmin = −0.15 e Å3
10 restraintsAbsolute structure: Flack (1983), 745 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.069 (10)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni10.15345 (3)0.18215 (2)0.53899 (3)0.03234 (9)
Cl20.03840 (8)0.33531 (5)0.61305 (6)0.03892 (15)
S20.33740 (7)0.22386 (7)0.41358 (6)0.04019 (16)
S1−0.05478 (8)0.10041 (6)0.38067 (5)0.03680 (15)
Cl10.26641 (9)0.06856 (6)0.70409 (7)0.04738 (16)
C1−0.1912 (3)0.03547 (18)0.4566 (2)0.0312 (5)
N1−0.1424 (3)0.0014 (2)0.5748 (2)0.0427 (5)
N2−0.3484 (3)0.0180 (2)0.3936 (2)0.0419 (5)
C20.5326 (3)0.2585 (2)0.5057 (2)0.0341 (5)
N30.6387 (3)0.3127 (2)0.4532 (3)0.0535 (7)
N40.5794 (3)0.2294 (3)0.6260 (2)0.0562 (7)
H1A−0.042 (3)−0.001 (3)0.618 (3)0.054 (10)*
H2A−0.412 (4)−0.012 (3)0.434 (3)0.052 (9)*
H3A0.597 (8)0.333 (4)0.376 (3)0.13 (2)*
H4A0.672 (3)0.255 (3)0.667 (3)0.067 (11)*
H1B−0.217 (4)−0.033 (3)0.599 (3)0.048 (9)*
H2B−0.392 (4)0.048 (2)0.327 (2)0.039 (8)*
H3B0.737 (4)0.327 (4)0.501 (5)0.095 (17)*
H4B0.513 (4)0.186 (2)0.656 (3)0.046 (10)*
U11U22U33U12U13U23
Ni10.02675 (16)0.03985 (16)0.03008 (15)−0.00044 (13)0.00613 (11)−0.00065 (13)
Cl20.0308 (3)0.0446 (3)0.0418 (3)−0.0015 (2)0.0094 (3)−0.0120 (3)
S20.0226 (3)0.0721 (4)0.0250 (3)−0.0055 (3)0.0039 (2)−0.0010 (3)
S10.0339 (3)0.0500 (4)0.0255 (3)−0.0108 (3)0.0052 (2)−0.0026 (3)
Cl10.0441 (4)0.0561 (4)0.0385 (4)0.0094 (3)0.0032 (3)0.0128 (3)
C10.0307 (12)0.0278 (11)0.0344 (13)−0.0013 (9)0.0063 (10)−0.0036 (10)
N10.0366 (13)0.0507 (13)0.0385 (12)−0.0128 (10)0.0046 (10)0.0096 (9)
N20.0301 (12)0.0458 (14)0.0462 (14)−0.0054 (10)0.0020 (10)0.0098 (11)
C20.0230 (12)0.0414 (13)0.0366 (13)0.0039 (10)0.0045 (9)−0.0070 (10)
N30.0270 (13)0.0680 (18)0.0648 (19)−0.0072 (11)0.0099 (13)0.0030 (14)
N40.0326 (14)0.095 (2)0.0335 (13)−0.0043 (14)−0.0065 (11)−0.0040 (14)
Ni1—Cl12.2516 (7)N1—H1B0.822 (18)
Ni1—Cl22.2726 (7)N2—H2A0.840 (19)
Ni1—S22.3079 (7)N2—H2B0.806 (18)
Ni1—S12.3177 (6)C2—N31.312 (4)
S2—C21.715 (2)C2—N41.315 (4)
S1—C11.716 (2)N3—H3A0.87 (2)
C1—N11.312 (3)N3—H3B0.86 (2)
C1—N21.317 (3)N4—H4A0.836 (19)
N1—H1A0.843 (19)N4—H4B0.865 (19)
Cl1—Ni1—Cl2108.56 (3)H1A—N1—H1B120 (3)
Cl1—Ni1—S2113.37 (3)C1—N2—H2A116 (3)
Cl2—Ni1—S2114.86 (3)C1—N2—H2B124 (2)
Cl1—Ni1—S1115.40 (3)H2A—N2—H2B117 (4)
Cl2—Ni1—S1107.62 (3)N3—C2—N4119.7 (3)
S2—Ni1—S196.69 (2)N3—C2—S2118.7 (2)
C2—S2—Ni1110.56 (9)N4—C2—S2121.6 (2)
C1—S1—Ni1105.95 (8)C2—N3—H3A114 (4)
N1—C1—N2119.3 (2)C2—N3—H3B117 (4)
N1—C1—S1121.80 (19)H3A—N3—H3B128 (6)
N2—C1—S1118.9 (2)C2—N4—H4A116 (3)
C1—N1—H1A126 (3)C2—N4—H4B118 (3)
C1—N1—H1B113 (3)H4A—N4—H4B126 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1A···Cl10.84 (3)2.60 (3)3.388 (3)157 (3)
N1—H1B···Cl2i0.83 (3)2.56 (3)3.365 (3)164 (3)
N2—H2A···Cl2i0.83 (3)2.75 (3)3.499 (2)150 (3)
N2—H2B···Cl2ii0.81 (2)2.64 (2)3.432 (2)166 (3)
N3—H3A···Cl1iii0.86 (3)2.83 (5)3.423 (3)128 (5)
N3—H3B···Cl2iv0.86 (4)2.47 (4)3.317 (3)168 (4)
N4—H4A···S2v0.84 (3)2.70 (3)3.366 (2)137 (3)
N4—H4B···Cl10.86 (3)2.60 (3)3.448 (3)168 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯Cl10.84 (3)2.60 (3)3.388 (3)157 (3)
N1—H1B⋯Cl2i0.83 (3)2.56 (3)3.365 (3)164 (3)
N2—H2A⋯Cl2i0.83 (3)2.75 (3)3.499 (2)150 (3)
N2—H2B⋯Cl2ii0.81 (2)2.64 (2)3.432 (2)166 (3)
N3—H3A⋯Cl1iii0.86 (3)2.83 (5)3.423 (3)128 (5)
N3—H3B⋯Cl2iv0.86 (4)2.47 (4)3.317 (3)168 (4)
N4—H4A⋯S2v0.84 (3)2.70 (3)3.366 (2)137 (3)
N4—H4B⋯Cl10.86 (3)2.60 (3)3.448 (3)168 (3)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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