| Literature DB >> 22412415 |
Abstract
The structure of the polymeric title compound, [CuCl(CH(4)N(2)S)(2)](n), has been redetermined to modern standards of precision with anisotropic refinement and location of the H atoms. The previous structure report [Spofford & Amma (1970 ▶). Acta Cryst. B26, 1474-1483] is generally confirmed to higher precision [typical Cu-S bond length s.u. values = 0.005 (old) and 0.001 Å (new)]. The asymmetric unit contains two formula units, with both Cu(I) atoms coordinated by one terminal S atom and two bridging S atoms of thio-urea ligands. This connectivity leads to polymeric [100] chains in the crystal. If very long contacts to nearby chloride ions [2.8687 (9) and 3.1394 (12) Å] are considered to be bonding, then very distorted CuS(3)Cl tetra-hedral coordination polyhedra arise. The crystal structure is consolidated by weak intra- and inter-chain N-H⋯S and N-H⋯Cl hydrogen bonds.Entities:
Year: 2012 PMID: 22412415 PMCID: PMC3297225 DOI: 10.1107/S1600536812004448
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [CuCl(CH4N2S)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 368 reflections |
| θ = 1.7–27.2° | |
| µ = 3.32 mm−1 | |
| β = 92.326 (2)° | Prism, colourless |
| 0.45 × 0.18 × 0.07 mm | |
| Bruker APEXII CCD detector diffractometer | 4089 independent reflections |
| Radiation source: fine-focus sealed tube | 3372 reflections with |
| Graphite monochromator | |
| ω and φ scans | θmax = 28.0°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 18106 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| All H-atom parameters refined | |
| 4089 reflections | (Δ/σ)max = 0.001 |
| 245 parameters | Δρmax = 0.58 e Å−3 |
| 16 restraints | Δρmin = −0.85 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cu1 | 0.20578 (8) | 0.31958 (6) | 0.100266 (15) | 0.02808 (13) | |
| Cu2 | −0.13231 (8) | 0.24956 (6) | 0.157138 (12) | 0.02293 (12) | |
| Cl1 | −0.45164 (14) | 0.01524 (10) | 0.18514 (2) | 0.01749 (17) | |
| Cl2 | 0.35733 (14) | 0.18063 (12) | 0.02357 (3) | 0.0253 (2) | |
| S3 | 0.05347 (13) | 0.07669 (10) | 0.11866 (2) | 0.01369 (17) | |
| S4 | 0.06418 (14) | 0.35188 (12) | 0.20688 (3) | 0.0207 (2) | |
| S2 | 0.02223 (14) | 0.52774 (12) | 0.06966 (3) | 0.01974 (19) | |
| S1 | 0.55003 (14) | 0.38438 (11) | 0.13126 (3) | 0.01895 (19) | |
| C4 | −0.1303 (6) | 0.3857 (4) | 0.24079 (10) | 0.0203 (8) | |
| C3 | −0.1615 (5) | 0.0262 (4) | 0.08459 (9) | 0.0148 (7) | |
| C1 | 0.5411 (6) | 0.5852 (4) | 0.14784 (10) | 0.0183 (7) | |
| C2 | 0.2234 (6) | 0.6102 (4) | 0.04098 (10) | 0.0179 (7) | |
| N3 | 0.4489 (5) | 0.5983 (5) | 0.04812 (10) | 0.0268 (8) | |
| N1 | 0.7193 (6) | 0.6469 (4) | 0.16698 (10) | 0.0277 (8) | |
| N7 | −0.3535 (5) | 0.3549 (5) | 0.23575 (10) | 0.0298 (8) | |
| N2 | 0.3566 (5) | 0.6769 (4) | 0.14099 (9) | 0.0224 (7) | |
| N4 | 0.1543 (5) | 0.6897 (5) | 0.01073 (9) | 0.0259 (7) | |
| N6 | −0.3721 (5) | −0.0059 (4) | 0.09504 (9) | 0.0227 (7) | |
| N5 | −0.1090 (5) | 0.0156 (4) | 0.04974 (8) | 0.0218 (7) | |
| N8 | −0.0560 (6) | 0.4419 (5) | 0.27368 (10) | 0.0295 (8) | |
| H5A | 0.026 (4) | 0.043 (5) | 0.0426 (12) | 0.037 (13)* | |
| H6A | −0.482 (6) | −0.015 (6) | 0.0781 (11) | 0.049 (15)* | |
| H7A | −0.398 (7) | 0.304 (5) | 0.2160 (8) | 0.034 (13)* | |
| H8A | −0.148 (6) | 0.478 (6) | 0.2898 (10) | 0.040 (14)* | |
| H3A | 0.500 (7) | 0.538 (4) | 0.0666 (8) | 0.023 (11)* | |
| H4A | 0.258 (5) | 0.731 (5) | −0.0024 (10) | 0.024 (11)* | |
| H5B | −0.207 (6) | −0.017 (5) | 0.0328 (9) | 0.028 (11)* | |
| H6B | −0.401 (7) | 0.005 (5) | 0.1181 (6) | 0.027 (12)* | |
| H7B | −0.443 (7) | 0.391 (6) | 0.2526 (10) | 0.043 (14)* | |
| H8B | 0.082 (4) | 0.477 (6) | 0.2753 (14) | 0.048 (15)* | |
| H2B | 0.358 (7) | 0.775 (3) | 0.1496 (11) | 0.025 (12)* | |
| H1B | 0.817 (6) | 0.573 (4) | 0.1748 (11) | 0.025 (11)* | |
| H4B | 0.016 (4) | 0.692 (5) | 0.0030 (12) | 0.030 (12)* | |
| H3B | 0.537 (7) | 0.639 (6) | 0.0320 (10) | 0.041 (14)* | |
| H2A | 0.249 (5) | 0.639 (5) | 0.1260 (9) | 0.026 (11)* | |
| H1A | 0.715 (8) | 0.743 (3) | 0.1764 (13) | 0.044 (14)* |
| Cu1 | 0.0184 (2) | 0.0208 (2) | 0.0442 (3) | −0.00450 (19) | −0.0103 (2) | 0.0088 (2) |
| Cu2 | 0.0198 (2) | 0.0286 (3) | 0.0199 (2) | 0.00834 (19) | −0.00549 (18) | −0.0093 (2) |
| Cl1 | 0.0177 (4) | 0.0183 (4) | 0.0164 (4) | 0.0011 (3) | 0.0005 (3) | −0.0003 (3) |
| Cl2 | 0.0123 (4) | 0.0327 (5) | 0.0309 (5) | −0.0007 (4) | 0.0013 (3) | 0.0069 (4) |
| S3 | 0.0108 (3) | 0.0163 (4) | 0.0139 (4) | 0.0007 (3) | −0.0005 (3) | −0.0006 (3) |
| S4 | 0.0119 (4) | 0.0297 (5) | 0.0202 (4) | 0.0024 (3) | −0.0022 (3) | −0.0077 (4) |
| S2 | 0.0102 (4) | 0.0267 (5) | 0.0223 (5) | 0.0015 (3) | 0.0006 (3) | 0.0057 (4) |
| S1 | 0.0160 (4) | 0.0135 (4) | 0.0266 (5) | 0.0012 (3) | −0.0077 (4) | −0.0010 (3) |
| C4 | 0.0162 (16) | 0.0191 (18) | 0.0251 (19) | 0.0030 (14) | −0.0043 (14) | −0.0062 (15) |
| C3 | 0.0121 (15) | 0.0167 (17) | 0.0156 (17) | −0.0031 (13) | −0.0002 (13) | −0.0031 (13) |
| C1 | 0.0169 (16) | 0.0179 (18) | 0.0200 (18) | −0.0008 (14) | 0.0007 (14) | 0.0027 (14) |
| C2 | 0.0138 (15) | 0.0233 (19) | 0.0166 (17) | 0.0016 (14) | −0.0019 (13) | −0.0019 (14) |
| N3 | 0.0121 (14) | 0.042 (2) | 0.0262 (19) | −0.0001 (14) | 0.0008 (13) | 0.0125 (16) |
| N1 | 0.0277 (17) | 0.0149 (17) | 0.039 (2) | 0.0035 (14) | −0.0143 (15) | −0.0072 (15) |
| N7 | 0.0121 (14) | 0.051 (2) | 0.0263 (19) | −0.0026 (15) | 0.0018 (14) | −0.0180 (17) |
| N2 | 0.0181 (15) | 0.0173 (16) | 0.0314 (18) | 0.0034 (13) | −0.0036 (13) | −0.0054 (15) |
| N4 | 0.0114 (14) | 0.041 (2) | 0.0249 (18) | −0.0017 (14) | −0.0019 (13) | 0.0098 (15) |
| N6 | 0.0153 (14) | 0.0362 (19) | 0.0166 (16) | −0.0091 (14) | 0.0006 (13) | −0.0030 (15) |
| N5 | 0.0152 (15) | 0.0377 (19) | 0.0123 (15) | −0.0063 (14) | −0.0001 (12) | −0.0044 (13) |
| N8 | 0.0185 (16) | 0.046 (2) | 0.0237 (18) | −0.0033 (16) | −0.0016 (14) | −0.0193 (16) |
| Cu1—S1 | 2.3091 (9) | C1—N2 | 1.320 (4) |
| Cu1—S2 | 2.2617 (10) | C2—N4 | 1.314 (5) |
| Cu1—S3 | 2.2728 (10) | C2—N3 | 1.327 (4) |
| Cu1—Cl2 | 3.1394 (12) | N3—H3A | 0.867 (19) |
| Cu2—S1i | 2.3081 (9) | N3—H3B | 0.853 (19) |
| Cu2—S3 | 2.2747 (9) | N1—H1B | 0.862 (19) |
| Cu2—S4 | 2.2421 (9) | N1—H1A | 0.855 (19) |
| Cu2—Cl1 | 2.8687 (9) | N7—H7A | 0.854 (19) |
| Cu1—Cu2 | 2.9470 (7) | N7—H7B | 0.867 (19) |
| S3—C3 | 1.761 (3) | N2—H2B | 0.852 (19) |
| S4—C4 | 1.717 (4) | N2—H2A | 0.867 (19) |
| S2—C2 | 1.725 (4) | N4—H4A | 0.852 (19) |
| S1—C1 | 1.739 (4) | N4—H4B | 0.837 (19) |
| S1—Cu2ii | 2.3081 (9) | N6—H6A | 0.866 (19) |
| C4—N8 | 1.324 (5) | N6—H6B | 0.857 (19) |
| C4—N7 | 1.325 (4) | N5—H5A | 0.862 (19) |
| C3—N5 | 1.305 (4) | N5—H5B | 0.856 (19) |
| C3—N6 | 1.320 (4) | N8—H8A | 0.856 (19) |
| C1—N1 | 1.319 (5) | N8—H8B | 0.852 (19) |
| Cl2—Cu1—S1 | 103.79 (3) | N5—C3—S3 | 119.8 (2) |
| Cl2—Cu1—S2 | 89.13 (4) | N6—C3—S3 | 119.1 (3) |
| Cl2—Cu1—S3 | 93.98 (3) | N1—C1—N2 | 119.7 (3) |
| S1—Cu1—S2 | 116.46 (4) | N1—C1—S1 | 120.1 (3) |
| S1—Cu1—S3 | 113.38 (4) | N2—C1—S1 | 120.1 (3) |
| S2—Cu1—S3 | 127.63 (4) | N4—C2—N3 | 117.5 (3) |
| Cl1—Cu2—S3 | 97.61 (3) | N4—C2—S2 | 119.7 (3) |
| Cl1—Cu2—S4 | 106.33 (3) | N3—C2—S2 | 122.8 (3) |
| Cl1—Cu2—S1i | 86.56 (3) | C2—N3—H3A | 120 (3) |
| S2—Cu1—S3 | 127.63 (4) | C2—N3—H3B | 117 (3) |
| S2—Cu1—S1 | 116.46 (4) | H3A—N3—H3B | 123 (4) |
| S3—Cu1—S1 | 113.38 (4) | C1—N1—H1B | 113 (3) |
| S2—Cu1—Cu2 | 99.70 (3) | C1—N1—H1A | 122 (3) |
| S3—Cu1—Cu2 | 49.63 (2) | H1B—N1—H1A | 122 (4) |
| S1—Cu1—Cu2 | 107.25 (3) | C4—N7—H7A | 118 (3) |
| S4—Cu2—S3 | 118.44 (3) | C4—N7—H7B | 117 (3) |
| S4—Cu2—S1i | 121.18 (4) | H7A—N7—H7B | 125 (4) |
| S3—Cu2—S1i | 116.02 (4) | C1—N2—H2B | 118 (3) |
| S4—Cu2—Cu1 | 98.66 (3) | C1—N2—H2A | 118 (3) |
| S3—Cu2—Cu1 | 49.58 (3) | H2B—N2—H2A | 124 (4) |
| S1i—Cu2—Cu1 | 99.90 (3) | C2—N4—H4A | 117 (3) |
| C3—S3—Cu1 | 105.83 (12) | C2—N4—H4B | 123 (3) |
| C3—S3—Cu2 | 103.14 (11) | H4A—N4—H4B | 120 (4) |
| Cu1—S3—Cu2 | 80.79 (3) | C3—N6—H6A | 119 (3) |
| C4—S4—Cu2 | 107.36 (12) | C3—N6—H6B | 118 (3) |
| C2—S2—Cu1 | 105.36 (12) | H6A—N6—H6B | 122 (4) |
| C1—S1—Cu2ii | 110.00 (12) | C3—N5—H5A | 121 (3) |
| C1—S1—Cu1 | 110.01 (12) | C3—N5—H5B | 122 (3) |
| Cu2ii—S1—Cu1 | 138.40 (4) | H5A—N5—H5B | 117 (4) |
| N8—C4—N7 | 117.9 (4) | C4—N8—H8A | 122 (3) |
| N8—C4—S4 | 119.4 (3) | C4—N8—H8B | 117 (3) |
| N7—C4—S4 | 122.7 (3) | H8A—N8—H8B | 117 (5) |
| N5—C3—N6 | 121.0 (3) |
| H··· | ||||
| N1—H1 | 0.85 (3) | 2.44 (3) | 3.230 (3) | 154 (4) |
| N1—H1 | 0.87 (3) | 2.55 (3) | 3.404 (4) | 171 (3) |
| N2—H2 | 0.87 (3) | 2.54 (3) | 3.379 (3) | 164 (3) |
| N2—H2 | 0.86 (3) | 2.56 (3) | 3.344 (3) | 153 (3) |
| N3—H3 | 0.87 (3) | 2.65 (3) | 3.488 (4) | 164 (3) |
| N3—H3 | 0.86 (4) | 2.57 (4) | 3.373 (4) | 156 (4) |
| N4—H4 | 0.85 (3) | 2.49 (3) | 3.309 (3) | 161 (3) |
| N4—H4 | 0.84 (3) | 2.55 (3) | 3.340 (3) | 157 (4) |
| N5—H5 | 0.86 (3) | 2.35 (3) | 3.197 (3) | 167 (4) |
| N5—H5 | 0.86 (3) | 2.55 (4) | 3.356 (3) | 157 (3) |
| N6—H6 | 0.87 (4) | 2.66 (4) | 3.323 (3) | 134 (4) |
| N6—H6 | 0.86 (2) | 2.44 (2) | 3.296 (3) | 174 (3) |
| N7—H7 | 0.85 (3) | 2.61 (4) | 3.343 (4) | 145 (3) |
| N7—H7 | 0.87 (4) | 2.55 (4) | 3.367 (4) | 157 (3) |
| N8—H8 | 0.86 (4) | 2.54 (4) | 3.326 (4) | 152 (3) |
| N8—H8 | 0.85 (3) | 2.55 (3) | 3.298 (4) | 148 (4) |
Selected bond lengths (Å)
| Cu1—S1 | 2.3091 (9) |
| Cu1—S2 | 2.2617 (10) |
| Cu1—S3 | 2.2728 (10) |
| Cu1—Cl2 | 3.1394 (12) |
| Cu2—S1i | 2.3081 (9) |
| Cu2—S3 | 2.2747 (9) |
| Cu2—S4 | 2.2421 (9) |
| Cu2—Cl1 | 2.8687 (9) |
Symmetry code: (i) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.85 (3) | 2.44 (3) | 3.230 (3) | 154 (4) |
| N1—H1 | 0.87 (3) | 2.55 (3) | 3.404 (4) | 171 (3) |
| N2—H2 | 0.87 (3) | 2.54 (3) | 3.379 (3) | 164 (3) |
| N2—H2 | 0.86 (3) | 2.56 (3) | 3.344 (3) | 153 (3) |
| N3—H3 | 0.87 (3) | 2.65 (3) | 3.488 (4) | 164 (3) |
| N3—H3 | 0.86 (4) | 2.57 (4) | 3.373 (4) | 156 (4) |
| N4—H4 | 0.85 (3) | 2.49 (3) | 3.309 (3) | 161 (3) |
| N4—H4 | 0.84 (3) | 2.55 (3) | 3.340 (3) | 157 (4) |
| N5—H5 | 0.86 (3) | 2.35 (3) | 3.197 (3) | 167 (4) |
| N5—H5 | 0.86 (3) | 2.55 (4) | 3.356 (3) | 157 (3) |
| N6—H6 | 0.87 (4) | 2.66 (4) | 3.323 (3) | 134 (4) |
| N6—H6 | 0.86 (2) | 2.44 (2) | 3.296 (3) | 174 (3) |
| N7—H7 | 0.85 (3) | 2.61 (4) | 3.343 (4) | 145 (3) |
| N7—H7 | 0.87 (4) | 2.55 (4) | 3.367 (4) | 157 (3) |
| N8—H8 | 0.86 (4) | 2.54 (4) | 3.326 (4) | 152 (3) |
| N8—H8 | 0.85 (3) | 2.55 (3) | 3.298 (4) | 148 (4) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) ; (viii) .