Literature DB >> 22346903

(Diamino-methyl-idene)sulfonium chloride-thio-urea (3/2).

Hafid Zouihri1.   

Abstract

The asymetric unit of the title salt, 3CH(5)N(2)S(+)·3Cl(-)·2CH(4)N(2)S, contains two mol-ecules of thio-urea, three (diamino-methyl-idene)sulfonium cations and three chloride anions. The crystal packing is stabilized by N-H⋯Cl, N-H⋯S, S-H⋯Cl and S-H⋯S hydrogen bonds, forming a three-dimensional network.

Entities:  

Year:  2012        PMID: 22346903      PMCID: PMC3274950          DOI: 10.1107/S1600536811052809

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of thio­urea salts, see: Xing et al. (1987 ▶); Velsko et al. (1990 ▶).

Experimental

Crystal data

3CH5N2S+·3Cl−·2CH4N2S M = 489.98 Monoclinic, a = 16.3469 (6) Å b = 8.9579 (3) Å c = 16.1505 (5) Å β = 109.105 (2)° V = 2234.72 (13) Å3 Z = 4 Mo Kα radiation μ = 0.89 mm−1 T = 100 K 0.45 × 0.32 × 0.29 mm

Data collection

Bruker APEXII CCD detector diffractometer 25994 measured reflections 4885 independent reflections 4190 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.026 wR(F 2) = 0.068 S = 1.06 4885 reflections 300 parameters 15 restraints All H-atom parameters refined Δρmax = 0.45 e Å−3 Δρmin = −0.39 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811052809/bt5746sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811052809/bt5746Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811052809/bt5746Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
3CH5N2S+·3Cl·2CH4N2SF(000) = 1016
Mr = 489.98Dx = 1.456 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 257 reflections
a = 16.3469 (6) Åθ = 1.9–26.7°
b = 8.9579 (3) ŵ = 0.89 mm1
c = 16.1505 (5) ÅT = 100 K
β = 109.105 (2)°Prism, colourless
V = 2234.72 (13) Å30.45 × 0.32 × 0.29 mm
Z = 4
Bruker APEXII CCD detector diffractometer4190 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.036
graphiteθmax = 27.0°, θmin = 1.3°
ω and φ scansh = −19→20
25994 measured reflectionsk = −11→11
4885 independent reflectionsl = −20→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.026Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.068All H-atom parameters refined
S = 1.06w = 1/[σ2(Fo2) + (0.030P)2 + 0.6051P] where P = (Fo2 + 2Fc2)/3
4885 reflections(Δ/σ)max = 0.001
300 parametersΔρmax = 0.45 e Å3
15 restraintsΔρmin = −0.39 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.38413 (9)0.58264 (16)0.27012 (9)0.0213 (3)
C20.25156 (10)0.52767 (18)0.50586 (9)0.0248 (3)
C30.11263 (10)0.86257 (17)0.22690 (10)0.0243 (3)
C40.07611 (10)0.32825 (17)0.03972 (10)0.0256 (3)
C50.56391 (11)0.66084 (17)0.01498 (10)0.0274 (3)
Cl10.36083 (2)0.16969 (4)0.21733 (2)0.02368 (9)
Cl20.14816 (2)0.26513 (4)0.30590 (2)0.02530 (9)
Cl30.25954 (3)0.95922 (5)0.52321 (3)0.03198 (10)
H10N0.1886 (13)1.0337 (17)0.2623 (13)0.049 (6)*
H11N−0.0063 (10)0.887 (2)0.2194 (12)0.039 (5)*
H12N0.0483 (13)1.0283 (18)0.2478 (13)0.047 (6)*
H13N0.1429 (12)0.326 (2)0.1616 (10)0.038 (5)*
H14N0.1828 (11)0.408 (2)0.1057 (12)0.039 (5)*
H15N0.0337 (12)0.357 (2)−0.0832 (11)0.045 (6)*
H16N0.1202 (11)0.429 (2)−0.0372 (12)0.039 (5)*
H17N0.6669 (11)0.561 (2)0.0740 (13)0.044 (6)*
H18N0.6263 (13)0.628 (2)0.1350 (11)0.045 (6)*
H19N0.6042 (11)0.582 (2)−0.0693 (12)0.042 (6)*
H1N0.2689 (14)0.552 (2)0.2609 (13)0.048 (6)*
H20N0.5209 (13)0.667 (2)−0.1093 (12)0.035 (5)*
H2N0.3116 (12)0.413 (2)0.2562 (12)0.034 (5)*
H2S0.1772 (14)0.501 (2)0.3670 (14)0.063 (7)*
H3N0.4498 (11)0.418 (2)0.2606 (11)0.028 (5)*
H4N0.5001 (12)0.556 (2)0.2727 (12)0.033 (5)*
H4S−0.0549 (15)0.234 (2)−0.0260 (15)0.065 (7)*
H5N0.2310 (11)0.331 (2)0.4620 (10)0.033 (5)*
H5S0.4337 (15)0.768 (2)−0.0474 (15)0.068 (7)*
H6N0.2823 (13)0.341 (2)0.5582 (11)0.052 (6)*
H7N0.2821 (12)0.7027 (17)0.5739 (12)0.036 (5)*
H8N0.3128 (12)0.567 (2)0.6237 (10)0.042 (6)*
H9N0.2319 (10)0.890 (2)0.2464 (12)0.038 (5)*
N10.31308 (10)0.50667 (17)0.26422 (10)0.0286 (3)
N100.62646 (10)0.61272 (18)0.08312 (9)0.0349 (3)
N20.45314 (10)0.50807 (17)0.26805 (10)0.0295 (3)
N30.25464 (10)0.38179 (17)0.50862 (10)0.0341 (3)
N40.28862 (11)0.60913 (18)0.57553 (10)0.0362 (4)
N50.18693 (10)0.93523 (17)0.24771 (11)0.0355 (3)
N60.04351 (10)0.93486 (16)0.23118 (10)0.0320 (3)
N70.14216 (10)0.35255 (17)0.11049 (9)0.0307 (3)
N80.07441 (10)0.37960 (17)−0.03649 (9)0.0307 (3)
N90.56308 (10)0.63381 (18)−0.06456 (9)0.0317 (3)
S10.38657 (3)0.77282 (4)0.28160 (3)0.02625 (10)
S20.19881 (3)0.62081 (5)0.40844 (3)0.03084 (11)
S30.10697 (3)0.67952 (4)0.19506 (3)0.02933 (10)
S4−0.00958 (3)0.22533 (6)0.05196 (4)0.04788 (14)
S50.48080 (3)0.76310 (6)0.03389 (3)0.04573 (13)
U11U22U33U12U13U23
C10.0220 (8)0.0232 (7)0.0164 (7)0.0000 (6)0.0031 (6)−0.0008 (5)
C20.0248 (8)0.0286 (8)0.0211 (8)0.0015 (6)0.0077 (6)0.0016 (6)
C30.0261 (8)0.0229 (7)0.0215 (7)0.0010 (6)0.0045 (6)0.0007 (6)
C40.0254 (8)0.0247 (8)0.0275 (8)−0.0002 (6)0.0099 (7)−0.0041 (6)
C50.0271 (9)0.0276 (8)0.0276 (8)−0.0040 (7)0.0093 (7)−0.0006 (6)
Cl10.0267 (2)0.02205 (18)0.02225 (18)−0.00058 (14)0.00803 (15)−0.00263 (13)
Cl20.0296 (2)0.02340 (18)0.02352 (19)−0.00071 (15)0.00952 (16)−0.00253 (14)
Cl30.0266 (2)0.0341 (2)0.0364 (2)0.00110 (16)0.01196 (17)−0.00136 (17)
N10.0235 (8)0.0219 (7)0.0418 (8)−0.0027 (6)0.0126 (6)−0.0068 (6)
N100.0344 (9)0.0496 (9)0.0197 (7)0.0044 (7)0.0076 (6)0.0011 (6)
N20.0250 (8)0.0211 (7)0.0433 (9)−0.0008 (6)0.0122 (6)−0.0021 (6)
N30.0438 (10)0.0277 (8)0.0246 (8)0.0012 (7)0.0027 (7)0.0029 (6)
N40.0482 (10)0.0320 (8)0.0220 (7)−0.0004 (7)0.0027 (7)−0.0004 (6)
N50.0243 (8)0.0257 (7)0.0560 (10)−0.0006 (6)0.0124 (7)−0.0089 (7)
N60.0255 (8)0.0237 (7)0.0463 (9)0.0012 (6)0.0113 (7)−0.0020 (6)
N70.0317 (8)0.0394 (8)0.0207 (7)−0.0071 (7)0.0082 (6)−0.0012 (6)
N80.0270 (8)0.0418 (8)0.0218 (7)−0.0056 (7)0.0060 (6)−0.0018 (6)
N90.0287 (8)0.0426 (9)0.0212 (7)0.0079 (7)0.0047 (6)0.0034 (6)
S10.0223 (2)0.01955 (19)0.0319 (2)−0.00003 (15)0.00212 (16)−0.00217 (15)
S20.0373 (2)0.0297 (2)0.0220 (2)0.00586 (17)0.00489 (17)0.00139 (16)
S30.0255 (2)0.02236 (19)0.0326 (2)0.00159 (15)−0.00071 (17)−0.00544 (16)
S40.0410 (3)0.0524 (3)0.0473 (3)−0.0191 (2)0.0104 (2)0.0089 (2)
S50.0439 (3)0.0502 (3)0.0446 (3)0.0125 (2)0.0165 (2)−0.0067 (2)
C1—N11.322 (2)N4—H8N0.841 (15)
C1—N21.321 (2)N5—H10N0.911 (15)
C2—N41.311 (2)N5—H9N0.847 (14)
C2—N31.308 (2)N6—H11N0.884 (14)
C3—N61.324 (2)N6—H12N0.875 (15)
C3—N51.321 (2)N7—H14N0.851 (14)
C4—N71.308 (2)N7—H13N0.855 (14)
C4—N81.306 (2)N8—H16N0.873 (14)
C5—N101.306 (2)N8—H15N0.851 (15)
C5—N91.303 (2)N9—H19N0.840 (15)
N1—H1N0.81 (2)N9—H20N0.87 (2)
N1—H2N0.84 (2)S1—C11.7127 (15)
N10—H18N0.850 (15)S2—H2S1.25 (2)
N10—H17N0.857 (15)S2—C21.7398 (15)
N2—H4N0.861 (19)S3—C31.7120 (16)
N2—H3N0.811 (19)S4—H4S1.24 (2)
N3—H6N0.862 (15)S4—C41.7414 (16)
N3—H5N0.855 (14)S5—H5S1.29 (2)
N4—H7N0.844 (15)S5—C51.7464 (17)
C2—S2—H2S92.4 (10)C1—N2—H3N119.1 (13)
C5—S5—H5S94.6 (10)C1—N2—H4N119.4 (12)
C4—S4—H4S94.9 (10)H3N—N2—H4N121.4 (18)
N2—C1—N1118.37 (15)C3—N5—H9N119.5 (13)
N2—C1—S1121.06 (12)C3—N5—H10N119.3 (13)
N1—C1—S1120.56 (12)H9N—N5—H10N121.2 (18)
N8—C4—N7121.45 (15)C4—N7—H13N123.0 (13)
N8—C4—S4121.58 (13)C4—N7—H14N117.6 (13)
N7—C4—S4116.97 (12)H13N—N7—H14N118.9 (18)
N9—C5—N10121.48 (16)C1—N1—H2N120.1 (12)
N9—C5—S5120.81 (13)C1—N1—H1N119.4 (15)
N10—C5—S5117.71 (13)H2N—N1—H1N119.9 (19)
N5—C3—N6118.38 (15)C5—N9—H20N120.2 (12)
N5—C3—S3120.21 (12)C5—N9—H19N116.2 (13)
N6—C3—S3121.41 (13)H20N—N9—H19N123.6 (18)
N3—C2—N4121.66 (15)C3—N6—H12N119.5 (14)
N3—C2—S2120.80 (12)C3—N6—H11N119.5 (12)
N4—C2—S2117.53 (13)H12N—N6—H11N120.9 (18)
C2—N3—H5N119.8 (13)C5—N10—H17N117.8 (13)
C2—N3—H6N117.5 (14)C5—N10—H18N121.4 (14)
H5N—N3—H6N123 (2)H17N—N10—H18N120.7 (19)
C2—N4—H8N119.2 (14)C4—N8—H15N121.5 (14)
C2—N4—H7N120.5 (13)C4—N8—H16N115.9 (13)
H8N—N4—H7N119.7 (19)H15N—N8—H16N122.2 (18)
D—H···AD—HH···AD···AD—H···A
N1—H1N···S30.82 (2)2.76 (2)3.5403 (17)161.9 (18)
N1—H2N···Cl10.848 (18)2.474 (18)3.2683 (16)156.2 (18)
N10—H17N···Cl3i0.86 (2)2.44 (2)3.2261 (17)152 (2)
N10—H18N···Cl1ii0.85 (2)2.35 (2)3.2019 (14)175 (2)
N2—H3N···Cl10.815 (18)2.624 (18)3.3656 (16)152.0 (17)
N2—H4N···Cl1ii0.86 (2)2.45 (2)3.3060 (17)174.5 (17)
N3—H5N···Cl20.86 (2)2.51 (2)3.3333 (16)161 (2)
N3—H6N···Cl1iii0.86 (2)2.47 (2)3.2799 (16)157 (2)
N4—H7N···Cl30.84 (2)2.43 (2)3.2422 (17)163 (2)
N4—H8N···Cl1iii0.84 (2)2.57 (2)3.3327 (16)151 (2)
N4—H8N···S1iv0.84 (2)2.83 (2)3.3571 (16)123 (2)
N5—H9N···S10.85 (2)2.62 (2)3.4493 (18)166 (2)
N5—H10N···Cl2v0.91 (2)2.35 (2)3.2262 (16)161 (2)
N6—H11N···Cl2vi0.88 (2)2.47 (2)3.3555 (17)176 (1)
N6—H12N···Cl2v0.88 (2)2.65 (2)3.4328 (15)149 (2)
N7—H13N···Cl20.86 (2)2.37 (2)3.2219 (15)177 (1)
N7—H14N···Cl3vii0.85 (2)2.42 (2)3.2066 (17)154 (2)
N8—H15N···S3viii0.85 (2)2.44 (2)3.2649 (16)164 (2)
N8—H16N···Cl3vii0.87 (2)2.38 (2)3.2036 (17)156 (2)
N9—H19N···Cl3i0.84 (2)2.38 (2)3.1674 (17)157 (2)
N9—H20N···S1vii0.872 (19)2.38 (2)3.2412 (16)167.7 (19)
S2—H2S···Cl21.253 (19)2.315 (19)3.5612 (6)172.9 (14)
S4—H4S···S3viii1.24 (2)2.69 (2)3.8755 (8)159.2 (15)
S5—H5S···S1vii1.29 (2)2.64 (2)3.8691 (7)159.3 (16)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N⋯S30.82 (2)2.76 (2)3.5403 (17)161.9 (18)
N1—H2N⋯Cl10.848 (18)2.474 (18)3.2683 (16)156.2 (18)
N10—H17N⋯Cl3i0.86 (2)2.45 (2)3.2261 (17)152 (2)
N10—H18N⋯Cl1ii0.85 (2)2.35 (2)3.2019 (14)175 (2)
N2—H3N⋯Cl10.815 (18)2.624 (18)3.3656 (16)152.0 (17)
N2—H4N⋯Cl1ii0.86 (2)2.45 (2)3.3060 (17)174.5 (17)
N3—H5N⋯Cl20.86 (2)2.51 (2)3.3333 (16)161 (2)
N3—H6N⋯Cl1iii0.86 (2)2.47 (2)3.2799 (16)157 (2)
N4—H7N⋯Cl30.84 (2)2.43 (2)3.2422 (17)163 (2)
N4—H8N⋯Cl1iii0.84 (2)2.57 (2)3.3327 (16)151 (2)
N4—H8N⋯S1iv0.84 (2)2.83 (2)3.3571 (16)123 (2)
N5—H9N⋯S10.85 (2)2.62 (2)3.4493 (18)166 (2)
N5—H10N⋯Cl2v0.91 (2)2.35 (2)3.2262 (16)161 (2)
N6—H11N⋯Cl2vi0.88 (2)2.47 (2)3.3555 (17)176 (1)
N6—H12N⋯Cl2v0.88 (2)2.65 (2)3.4328 (15)149 (2)
N7—H13N⋯Cl20.86 (2)2.37 (2)3.2219 (15)177 (1)
N7—H14N⋯Cl3vii0.85 (2)2.42 (2)3.2066 (17)154 (2)
N8—H15N⋯S3viii0.85 (2)2.44 (2)3.2649 (16)164 (2)
N8—H16N⋯Cl3vii0.87 (2)2.39 (2)3.2036 (17)156 (2)
N9—H19N⋯Cl3i0.84 (2)2.38 (2)3.1674 (17)157 (2)
N9—H20N⋯S1vii0.872 (19)2.38 (2)3.2412 (16)167.7 (19)
S2—H2S⋯Cl21.253 (19)2.315 (19)3.5612 (6)172.9 (14)
S4—H4S⋯S3viii1.24 (2)2.69 (2)3.8755 (8)159.2 (15)
S5—H5S⋯S1vii1.29 (2)2.64 (2)3.8691 (7)159.3 (16)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) ; (viii) .

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