Literature DB >> 22405014

Architecture of a dodecameric bacterial replicative helicase.

Meike Stelter1, Irina Gutsche, Ulrike Kapp, Alexandre Bazin, Goran Bajic, Gaël Goret, Marc Jamin, Joanna Timmins, Laurent Terradot.   

Abstract

Hexameric DnaB helicases are often loaded at DNA replication forks by interacting with the initiator protein DnaA and/or a helicase loader (DnaC in Escherichia coli). These loaders are not universally required, and DnaB from Helicobacter pylori was found to bypass DnaC when expressed in E. coli cells. The crystal structure of Helicobacter pylori DnaB C-terminal domain (HpDnaB-CTD) reveals a large two-helix insertion (named HPI) in the ATPase domain that protrudes away from the RecA fold. Biophysical characterization and electron microscopy (EM) analysis of the full-length protein show that HpDnaB forms head-to-head double hexamers remarkably similar to helicases found in some eukaryotes, archaea, and viruses. The docking of the HpDnaB-CTD structure into EM reconstruction of HpDnaB provides a model that shows how hexamerization of the CTD is facilitated by HPI-HPI interactions. The HpDnaB double-hexamer architecture supports an alternative strategy to load bacterial helicases onto forks in the absence of helicase loaders. Copyright Â
© 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22405014     DOI: 10.1016/j.str.2012.01.020

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  16 in total

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Authors:  S Chodavarapu; J M Kaguni
Journal:  Enzymes       Date:  2016-04-20

2.  Solid-state NMR chemical-shift perturbations indicate domain reorientation of the DnaG primase in the primosome of Helicobacter pylori.

Authors:  Carole Gardiennet; Thomas Wiegand; Alexandre Bazin; Riccardo Cadalbert; Britta Kunert; Denis Lacabanne; Irina Gutsche; Laurent Terradot; Beat H Meier; Anja Böckmann
Journal:  J Biomol NMR       Date:  2016-03-10       Impact factor: 2.835

3.  Variability and conservation of structural domains in divide-and-conquer approaches.

Authors:  Thomas Wiegand; Carole Gardiennet; Riccardo Cadalbert; Denis Lacabanne; Britta Kunert; Laurent Terradot; Anja Böckmann; Beat H Meier
Journal:  J Biomol NMR       Date:  2016-05-30       Impact factor: 2.835

4.  Mechanisms of opening and closing of the bacterial replicative helicase.

Authors:  Jillian Chase; Andrew Catalano; Alex J Noble; Edward T Eng; Paul Db Olinares; Kelly Molloy; Danaya Pakotiprapha; Martin Samuels; Brian Chait; Amedee des Georges; David Jeruzalmi
Journal:  Elife       Date:  2018-12-24       Impact factor: 8.140

Review 5.  Mechanisms for initiating cellular DNA replication.

Authors:  Alessandro Costa; Iris V Hood; James M Berger
Journal:  Annu Rev Biochem       Date:  2013       Impact factor: 23.643

6.  Crystal structure and mode of helicase binding of the C-terminal domain of primase from Helicobacter pylori.

Authors:  Syed Arif Abdul Rehman; Vijay Verma; Mohit Mazumder; Suman K Dhar; S Gourinath
Journal:  J Bacteriol       Date:  2013-04-12       Impact factor: 3.490

Review 7.  Loading strategies of ring-shaped nucleic acid translocases and helicases.

Authors:  Valerie L O'Shea; James M Berger
Journal:  Curr Opin Struct Biol       Date:  2013-12-18       Impact factor: 6.809

Review 8.  DNA Replication in Mycobacterium tuberculosis.

Authors:  Zanele Ditse; Meindert H Lamers; Digby F Warner
Journal:  Microbiol Spectr       Date:  2017-03

Review 9.  Loading mechanisms of ring helicases at replication origins.

Authors:  Panos Soultanas
Journal:  Mol Microbiol       Date:  2012-03-15       Impact factor: 3.501

Review 10.  Loading and activation of DNA replicative helicases: the key step of initiation of DNA replication.

Authors:  Yan Li; Hiroyuki Araki
Journal:  Genes Cells       Date:  2013-03-05       Impact factor: 1.891

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