Literature DB >> 22403062

Antiparallel β-sheet architecture in Iowa-mutant β-amyloid fibrils.

Wei Qiang1, Wai-Ming Yau, Yongquan Luo, Mark P Mattson, Robert Tycko.   

Abstract

Wild-type, full-length (40- and 42-residue) amyloid β-peptide (Aβ) fibrils have been shown by a variety of magnetic resonance techniques to contain cross-β structures in which the β-sheets have an in-register parallel supramolecular organization. In contrast, recent studies of fibrils formed in vitro by the Asp23-to-Asn mutant of 40-residue Aβ (D23N-Aβ(1-40)), which is associated with early onset neurodegeneration, indicate that D23N-Aβ(1-40) fibrils can contain either parallel or antiparallel β-sheets. We report a protocol for producing structurally pure antiparallel D23N-Aβ(1-40) fibril samples and a series of solid state nuclear magnetic resonance and electron microscopy measurements that lead to a specific model for the antiparallel D23N-Aβ(1-40) fibril structure. This model reveals how both parallel and antiparallel cross-β structures can be constructed from similar peptide monomer conformations and stabilized by similar sets of interactions, primarily hydrophobic in nature. We find that antiparallel D23N-Aβ(1-40) fibrils are thermodynamically metastable with respect to conversion to parallel structures, propagate less efficiently than parallel fibrils in seeded fibril growth, and therefore must nucleate more efficiently than parallel fibrils in order to be observable. Experiments in neuronal cell cultures indicate that both antiparallel and parallel D23N-Aβ(1-40) fibrils are cytotoxic. Thus, our antiparallel D23N-Aβ(1-40) fibril model represents a specific "toxic intermediate" in the aggregation process of a disease-associated Aβ mutant.

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Year:  2012        PMID: 22403062      PMCID: PMC3311365          DOI: 10.1073/pnas.1111305109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  46 in total

1.  Structural features of the Abeta amyloid fibril elucidated by limited proteolysis.

Authors:  I Kheterpal; A Williams; C Murphy; B Bledsoe; R Wetzel
Journal:  Biochemistry       Date:  2001-10-02       Impact factor: 3.162

2.  Supramolecular structural constraints on Alzheimer's beta-amyloid fibrils from electron microscopy and solid-state nuclear magnetic resonance.

Authors:  Oleg N Antzutkin; Richard D Leapman; John J Balbach; Robert Tycko
Journal:  Biochemistry       Date:  2002-12-24       Impact factor: 3.162

3.  Constraints on supramolecular structure in amyloid fibrils from two-dimensional solid-state NMR spectroscopy with uniform isotopic labeling.

Authors:  Robert Tycko; Yoshitaka Ishii
Journal:  J Am Chem Soc       Date:  2003-06-04       Impact factor: 15.419

4.  Frequency selective heteronuclear dipolar recoupling in rotating solids: accurate (13)C-(15)N distance measurements in uniformly (13)C,(15)N-labeled peptides.

Authors:  C P Jaroniec; B A Tounge; J Herzfeld; R G Griffin
Journal:  J Am Chem Soc       Date:  2001-04-18       Impact factor: 15.419

5.  Novel amyloid precursor protein mutation in an Iowa family with dementia and severe cerebral amyloid angiopathy.

Authors:  T J Grabowski; H S Cho; J P Vonsattel; G W Rebeck; S M Greenberg
Journal:  Ann Neurol       Date:  2001-06       Impact factor: 10.422

6.  Multiple quantum solid-state NMR indicates a parallel, not antiparallel, organization of beta-sheets in Alzheimer's beta-amyloid fibrils.

Authors:  O N Antzutkin; J J Balbach; R D Leapman; N W Rizzo; J Reed; R Tycko
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-21       Impact factor: 11.205

7.  Studies on the in vitro assembly of a beta 1-40: implications for the search for a beta fibril formation inhibitors.

Authors:  C S Goldsbury; S Wirtz; S A Müller; S Sunderji; P Wicki; U Aebi; P Frey
Journal:  J Struct Biol       Date:  2000-06       Impact factor: 2.867

8.  Supramolecular structure in full-length Alzheimer's beta-amyloid fibrils: evidence for a parallel beta-sheet organization from solid-state nuclear magnetic resonance.

Authors:  John J Balbach; Aneta T Petkova; Nathan A Oyler; Oleg N Antzutkin; David J Gordon; Stephen C Meredith; Robert Tycko
Journal:  Biophys J       Date:  2002-08       Impact factor: 4.033

9.  Intermolecular alignment in β2-microglobulin amyloid fibrils.

Authors:  Galia T Debelouchina; Geoffrey W Platt; Marvin J Bayro; Sheena E Radford; Robert G Griffin
Journal:  J Am Chem Soc       Date:  2010-11-15       Impact factor: 15.419

10.  Structural and dynamic features of Alzheimer's Abeta peptide in amyloid fibrils studied by site-directed spin labeling.

Authors:  Marianna Török; Saskia Milton; Rakez Kayed; Peng Wu; Theresa McIntire; Charles G Glabe; Ralf Langen
Journal:  J Biol Chem       Date:  2002-08-13       Impact factor: 5.157

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  130 in total

1.  Steric Crowding of the Turn Region Alters the Tertiary Fold of Amyloid-β18-35 and Makes It Soluble.

Authors:  Muralidharan Chandrakesan; Debanjan Bhowmik; Bidyut Sarkar; Rajiv Abhyankar; Harwinder Singh; Mamata Kallianpur; Sucheta P Dandekar; Perunthiruthy K Madhu; Sudipta Maiti; Venus Singh Mithu
Journal:  J Biol Chem       Date:  2015-10-20       Impact factor: 5.157

2.  Molecular structure of monomorphic peptide fibrils within a kinetically trapped hydrogel network.

Authors:  Katelyn Nagy-Smith; Eric Moore; Joel Schneider; Robert Tycko
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-27       Impact factor: 11.205

3.  Crystal Structures of IAPP Amyloidogenic Segments Reveal a Novel Packing Motif of Out-of-Register Beta Sheets.

Authors:  Angela B Soriaga; Smriti Sangwan; Ramsay Macdonald; Michael R Sawaya; David Eisenberg
Journal:  J Phys Chem B       Date:  2016-01-11       Impact factor: 2.991

Review 4.  Prions and the potential transmissibility of protein misfolding diseases.

Authors:  Allison Kraus; Bradley R Groveman; Byron Caughey
Journal:  Annu Rev Microbiol       Date:  2013-06-28       Impact factor: 15.500

5.  Differential contribution of isoaspartate post-translational modifications to the fibrillization and toxic properties of amyloid β and the Asn23 Iowa mutation.

Authors:  Silvia Fossati; Krysti Todd; Krystal Sotolongo; Jorge Ghiso; Agueda Rostagno
Journal:  Biochem J       Date:  2013-12-15       Impact factor: 3.857

6.  A long-lived Aβ oligomer resistant to fibrillization.

Authors:  Mimi Nick; Yibing Wu; Nathan W Schmidt; Stanley B Prusiner; Jan Stöhr; William F DeGrado
Journal:  Biopolymers       Date:  2018-01-10       Impact factor: 2.505

7.  The on-fibrillation-pathway membrane content leakage and off-fibrillation-pathway lipid mixing induced by 40-residue β-amyloid peptides in biologically relevant model liposomes.

Authors:  Qinghui Cheng; Zhi-Wen Hu; Katelynne E Doherty; Yuto J Tobin-Miyaji; Wei Qiang
Journal:  Biochim Biophys Acta Biomembr       Date:  2018-03-13       Impact factor: 3.747

8.  Phenyl-Ring Dynamics in Amyloid Fibrils and Proteins: The Microscopic-Order-Macroscopic-Disorder Perspective.

Authors:  Eva Meirovitch; Zhichun Liang; Jack H Freed
Journal:  J Phys Chem B       Date:  2018-09-10       Impact factor: 2.991

Review 9.  Biomolecular Assemblies: Moving from Observation to Predictive Design.

Authors:  Corey J Wilson; Andreas S Bommarius; Julie A Champion; Yury O Chernoff; David G Lynn; Anant K Paravastu; Chen Liang; Ming-Chien Hsieh; Jennifer M Heemstra
Journal:  Chem Rev       Date:  2018-10-03       Impact factor: 60.622

10.  Frequency-selective REDOR and spin-diffusion relays in uniformly labeled whole cells.

Authors:  David M Rice; Joseph A H Romaniuk; Lynette Cegelski
Journal:  Solid State Nucl Magn Reson       Date:  2015-10-14       Impact factor: 2.293

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