Literature DB >> 22394513

Peptide truncation leads to a twist and an unusual increase in affinity for casitas B-lineage lymphoma tyrosine kinase binding domain.

Eric A Kumar1, Ziyan Yuan, Nicholas Y Palermo, Lin Dong, Gulzar Ahmad, G L Lokesh, Carol Kolar, Smitha Kizhake, Gloria E O Borgstahl, Hamid Band, Amarnath Natarajan.   

Abstract

We describe truncation and SAR studies to identify a pentapeptide that binds Cbl tyrosine kinase binding domain with a higher affinity than the parental peptide. The pentapeptide has an alternative binding mode that allows occupancy of a previously uncharacterized groove. A peptide library was used to map the binding site and define the interface landscape. Our results suggest that the pentapeptide is an ideal starting point for the development of inhibitors against Cbl driven diseases.
© 2012 American Chemical Society

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Year:  2012        PMID: 22394513      PMCID: PMC3325325          DOI: 10.1021/jm300078z

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  31 in total

1.  Structural characterization of a novel Cbl phosphotyrosine recognition motif in the APS family of adapter proteins.

Authors:  Junjie Hu; Stevan R Hubbard
Journal:  J Biol Chem       Date:  2005-02-28       Impact factor: 5.157

Review 2.  Ubiquitin in trafficking: the network at work.

Authors:  Filippo Acconcia; Sara Sigismund; Simona Polo
Journal:  Exp Cell Res       Date:  2008-10-28       Impact factor: 3.905

Review 3.  Peptidomimetics, a synthetic tool of drug discovery.

Authors:  Josef Vagner; Hongchang Qu; Victor J Hruby
Journal:  Curr Opin Chem Biol       Date:  2008-05-14       Impact factor: 8.822

4.  The structural basis of peptide-protein binding strategies.

Authors:  Nir London; Dana Movshovitz-Attias; Ora Schueler-Furman
Journal:  Structure       Date:  2010-02-10       Impact factor: 5.006

5.  The Cbl phosphotyrosine-binding domain selects a D(N/D)XpY motif and binds to the Tyr292 negative regulatory phosphorylation site of ZAP-70.

Authors:  M L Lupher; Z Songyang; S E Shoelson; L C Cantley; H Band
Journal:  J Biol Chem       Date:  1997-12-26       Impact factor: 5.157

6.  Novel c-CBL and CBL-b ubiquitin ligase mutations in human acute myeloid leukemia.

Authors:  Michael A Caligiuri; Roger Briesewitz; Jianhua Yu; Lisheng Wang; Min Wei; Kristy J Arnoczky; Trent B Marburger; Jing Wen; Danilo Perrotti; Clara D Bloomfield; Susan P Whitman
Journal:  Blood       Date:  2007-05-02       Impact factor: 22.113

7.  Gain-of-function of mutated C-CBL tumour suppressor in myeloid neoplasms.

Authors:  Masashi Sanada; Takahiro Suzuki; Lee-Yung Shih; Makoto Otsu; Motohiro Kato; Satoshi Yamazaki; Azusa Tamura; Hiroaki Honda; Mamiko Sakata-Yanagimoto; Keiki Kumano; Hideaki Oda; Tetsuya Yamagata; Junko Takita; Noriko Gotoh; Kumi Nakazaki; Norihiko Kawamata; Masafumi Onodera; Masaharu Nobuyoshi; Yasuhide Hayashi; Hiroshi Harada; Mineo Kurokawa; Shigeru Chiba; Hiraku Mori; Keiya Ozawa; Mitsuhiro Omine; Hisamaru Hirai; Hiromitsu Nakauchi; H Phillip Koeffler; Seishi Ogawa
Journal:  Nature       Date:  2009-07-20       Impact factor: 49.962

8.  Structural basis for a novel intrapeptidyl H-bond and reverse binding of c-Cbl-TKB domain substrates.

Authors:  Cherlyn Ng; Rebecca A Jackson; Jan P Buschdorf; Qingxiang Sun; Graeme R Guy; J Sivaraman
Journal:  EMBO J       Date:  2008-02-14       Impact factor: 11.598

9.  Mutations in CBL occur frequently in juvenile myelomonocytic leukemia.

Authors:  Mignon L Loh; Debbie S Sakai; Christian Flotho; Michelle Kang; Manfred Fliegauf; Sophie Archambeault; Charles G Mullighan; Leslie Chen; Eva Bergstraesser; Carlos E Bueso-Ramos; Peter D Emanuel; Henrik Hasle; Jean-Pierre Issa; Marry M van den Heuvel-Eibrink; Franco Locatelli; Jan Stary; Monica Trebo; Marcin Wlodarski; Marco Zecca; Kevin M Shannon; Charlotte M Niemeyer
Journal:  Blood       Date:  2009-07-01       Impact factor: 22.113

10.  Mutant Cbl proteins as oncogenic drivers in myeloproliferative disorders.

Authors:  Mayumi Naramura; Scott Nadeau; Bhopal Mohapatra; Gulzar Ahmad; Chandrani Mukhopadhyay; Martin Sattler; Srikumar M Raja; Amarnath Natarajan; Vimla Band; Hamid Band
Journal:  Oncotarget       Date:  2011-03
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  7 in total

Review 1.  Small molecule adenosine 5'-monophosphate activated protein kinase (AMPK) modulators and human diseases.

Authors:  Sandeep Rana; Elizabeth C Blowers; Amarnath Natarajan
Journal:  J Med Chem       Date:  2014-08-28       Impact factor: 7.446

2.  Preparation and optimisation of anionic liposomes for delivery of small peptides and cDNA to human corneal epithelial cells.

Authors:  Luís F Neves; Jinghua Duan; Adrienne Voelker; Anil Khanal; Lacey McNally; Jill Steinbach-Rankins; Brian P Ceresa
Journal:  J Microencapsul       Date:  2016-08-10       Impact factor: 3.142

Review 3.  Molecular pathways: cbl proteins in tumorigenesis and antitumor immunity-opportunities for cancer treatment.

Authors:  Mariya S Liyasova; Ke Ma; Stanley Lipkowitz
Journal:  Clin Cancer Res       Date:  2014-12-04       Impact factor: 12.531

4.  Synthesis of aminopyrazole analogs and their evaluation as CDK inhibitors for cancer therapy.

Authors:  Sandeep Rana; Yogesh A Sonawane; Margaret A Taylor; Smitha Kizhake; Muhammad Zahid; Amarnath Natarajan
Journal:  Bioorg Med Chem Lett       Date:  2018-10-15       Impact factor: 2.823

5.  Casitas B-Lineage Lymphoma RING Domain Inhibitors Protect Mice against High-Fat Diet-Induced Obesity and Insulin Resistance.

Authors:  Min Wu; Lin Sun; Ziyan Yuan Pessetto; Zhihe Zang; Xingliang Xie; Ling Zhong; Qing Su; Wang Zan; Xiurong Gao; Yan Zhao; Yiyi Sun
Journal:  PLoS One       Date:  2015-08-21       Impact factor: 3.240

6.  Development of a fluorescence polarization based high-throughput assay to identify Casitas B-lineage lymphoma RING domain regulators.

Authors:  Xingliang Xie; Lin Sun; Ziyan Yuan Pessetto; Yan Zhao; Zhihe Zang; Ling Zhong; Min Wu; Qing Su; Xiurong Gao; Wang Zan; Yiyi Sun
Journal:  PLoS One       Date:  2013-10-31       Impact factor: 3.240

7.  The paradox of conformational constraint in the design of Cbl(TKB)-binding peptides.

Authors:  Eric A Kumar; Qianyi Chen; Smitha Kizhake; Carol Kolar; Myungshim Kang; Chia-En A Chang; Gloria E O Borgstahl; Amarnath Natarajan
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

  7 in total

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