Literature DB >> 22394284

Bad statistical practice in pharmacology (and other basic biomedical disciplines): you probably don't know P.

Michael J Lew1.   

Abstract

Statistical analysis is universally used in the interpretation of the results of basic biomedical research, being expected by referees and readers alike. Its role in helping researchers to make reliable inference from their work and its contribution to the scientific process cannot be doubted, but can be improved. There is a widespread and pervasive misunderstanding of P-values that limits their utility as a guide to inference, and a change in the manner in which P-values are specified and interpreted will lead to improved outcomes. This paper explains the distinction between Fisher's P-values, which are local indices of evidence against the null hypothesis in the results of a particular experiment, and Neyman-Pearson α levels, which are global rates of false positive errors from unrelated experiments taken as an aggregate. The vast majority of papers published in pharmacological journals specify P-values, either as exact-values or as being less than a value (usually 0.05), but they are interpreted in a hybrid manner that detracts from their Fisherian role as indices of evidence without gaining the control of false positive and false negative error rate offered by a strict Neyman-Pearson approach. An informed choice between those approaches offers substantial advantages to the users of statistical tests over the current accidental hybrid approach.
© 2012 The Author. British Journal of Pharmacology © 2012 The British Pharmacological Society.

Mesh:

Year:  2012        PMID: 22394284      PMCID: PMC3419900          DOI: 10.1111/j.1476-5381.2012.01931.x

Source DB:  PubMed          Journal:  Br J Pharmacol        ISSN: 0007-1188            Impact factor:   8.739


  14 in total

1.  A practical solution to the pervasive problems of p values.

Authors:  Eric-Jan Wagenmakers
Journal:  Psychon Bull Rev       Date:  2007-10

2.  Good statistical practice in pharmacology. Problem 1.

Authors:  M Lew
Journal:  Br J Pharmacol       Date:  2007-07-09       Impact factor: 8.739

3.  Good statistical practice in pharmacology. Problem 2.

Authors:  M Lew
Journal:  Br J Pharmacol       Date:  2007-07-09       Impact factor: 8.739

4.  Confidence interval or p-value?: part 4 of a series on evaluation of scientific publications.

Authors:  Jean-Baptist du Prel; Gerhard Hommel; Bernd Röhrig; Maria Blettner
Journal:  Dtsch Arztebl Int       Date:  2009-05-08       Impact factor: 5.594

Review 5.  On contemporaneous controls, unlikely outcomes, boxes and replacing the 'Student': good statistical practice in pharmacology, problem 3.

Authors:  M J Lew
Journal:  Br J Pharmacol       Date:  2008-09-22       Impact factor: 8.739

6.  Data interpretation: using probability.

Authors:  Gb Drummond; Sl Vowler
Journal:  Br J Pharmacol       Date:  2011-07       Impact factor: 8.739

7.  Replication and p Intervals: p Values Predict the Future Only Vaguely, but Confidence Intervals Do Much Better.

Authors:  Geoff Cumming
Journal:  Perspect Psychol Sci       Date:  2008-07

8.  How can we tell if frogs jump further?

Authors:  Gordon B Drummond; Brian D M Tom
Journal:  Br J Pharmacol       Date:  2011-09       Impact factor: 8.739

9.  Value of p-value in biomedical research.

Authors:  Demosthenes B Panagiotakos
Journal:  Open Cardiovasc Med J       Date:  2008-11-18

10.  Presenting data: can you follow a recipe?

Authors:  Gordon B Drummond; Brian Dm Tom
Journal:  Br J Pharmacol       Date:  2012-02       Impact factor: 8.739

View more
  10 in total

1.  The fickle P value generates irreproducible results.

Authors:  Lewis G Halsey; Douglas Curran-Everett; Sarah L Vowler; Gordon B Drummond
Journal:  Nat Methods       Date:  2015-03       Impact factor: 28.547

2.  The p value wars (again).

Authors:  Ulrich Dirnagl
Journal:  Eur J Nucl Med Mol Imaging       Date:  2019-11       Impact factor: 9.236

3.  A cross-over experiment to investigate possible mechanisms for lower BMIs in people who habitually eat breakfast.

Authors:  S Reeves; J W Huber; L G Halsey; M Villegas-Montes; J Elgumati; T Smith
Journal:  Eur J Clin Nutr       Date:  2015-01-07       Impact factor: 4.016

Review 4.  A Guerilla Guide to Common Problems in 'Neurostatistics': Essential Statistical Topics in Neuroscience.

Authors:  Paul F Smith
Journal:  J Undergrad Neurosci Educ       Date:  2017-11-15

5.  Anticancer effects of tributyltin chloride and triphenyltin chloride in human breast cancer cell lines MCF-7 and MDA-MB-231.

Authors:  Luba Hunakova; D Macejova; L Toporova; J Brtko
Journal:  Tumour Biol       Date:  2015-12-09

6.  The reign of the p-value is over: what alternative analyses could we employ to fill the power vacuum?

Authors:  Lewis G Halsey
Journal:  Biol Lett       Date:  2019-05-31       Impact factor: 3.703

7.  Performing Contrast Analysis in Factorial Designs: From NHST to Confidence Intervals and Beyond.

Authors:  Stefan Wiens; Mats E Nilsson
Journal:  Educ Psychol Meas       Date:  2016-10-06       Impact factor: 2.821

8.  Mastering the scientific peer review process: tips for young authors from a young senior editor.

Authors:  Evgenios Agathokleous
Journal:  J For Res (Harbin)       Date:  2021-09-16       Impact factor: 2.149

9.  Statistical tests, P values, confidence intervals, and power: a guide to misinterpretations.

Authors:  Sander Greenland; Stephen J Senn; Kenneth J Rothman; John B Carlin; Charles Poole; Steven N Goodman; Douglas G Altman
Journal:  Eur J Epidemiol       Date:  2016-05-21       Impact factor: 8.082

10.  Fat King Penguins Are Less Steady on Their Feet.

Authors:  Astrid S T Willener; Yves Handrich; Lewis G Halsey; Siobhán Strike
Journal:  PLoS One       Date:  2016-02-17       Impact factor: 3.240

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.