Literature DB >> 22393022

Root gravitropism is regulated by a transient lateral auxin gradient controlled by a tipping-point mechanism.

Leah R Band1, Darren M Wells, Antoine Larrieu, Jianyong Sun, Alistair M Middleton, Andrew P French, Géraldine Brunoud, Ethel Mendocilla Sato, Michael H Wilson, Benjamin Péret, Marina Oliva, Ranjan Swarup, Ilkka Sairanen, Geraint Parry, Karin Ljung, Tom Beeckman, Jonathan M Garibaldi, Mark Estelle, Markus R Owen, Kris Vissenberg, T Charlie Hodgman, Tony P Pridmore, John R King, Teva Vernoux, Malcolm J Bennett.   

Abstract

Gravity profoundly influences plant growth and development. Plants respond to changes in orientation by using gravitropic responses to modify their growth. Cholodny and Went hypothesized over 80 years ago that plants bend in response to a gravity stimulus by generating a lateral gradient of a growth regulator at an organ's apex, later found to be auxin. Auxin regulates root growth by targeting Aux/IAA repressor proteins for degradation. We used an Aux/IAA-based reporter, domain II (DII)-VENUS, in conjunction with a mathematical model to quantify auxin redistribution following a gravity stimulus. Our multidisciplinary approach revealed that auxin is rapidly redistributed to the lower side of the root within minutes of a 90° gravity stimulus. Unexpectedly, auxin asymmetry was rapidly lost as bending root tips reached an angle of 40° to the horizontal. We hypothesize roots use a "tipping point" mechanism that operates to reverse the asymmetric auxin flow at the midpoint of root bending. These mechanistic insights illustrate the scientific value of developing quantitative reporters such as DII-VENUS in conjunction with parameterized mathematical models to provide high-resolution kinetics of hormone redistribution.

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Year:  2012        PMID: 22393022      PMCID: PMC3311388          DOI: 10.1073/pnas.1201498109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  30 in total

1.  Lateral relocation of auxin efflux regulator PIN3 mediates tropism in Arabidopsis.

Authors:  Jirí Friml; Justyna Wiśniewska; Eva Benková; Kurt Mendgen; Klaus Palme
Journal:  Nature       Date:  2002-02-14       Impact factor: 49.962

2.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

3.  Rapid degradation of auxin/indoleacetic acid proteins requires conserved amino acids of domain II and is proteasome dependent.

Authors:  J A Ramos; N Zenser; O Leyser; J Callis
Journal:  Plant Cell       Date:  2001-10       Impact factor: 11.277

4.  Gravity-regulated differential auxin transport from columella to lateral root cap cells.

Authors:  Iris Ottenschläger; Patricia Wolff; Chris Wolverton; Rishikesh P Bhalerao; Göran Sandberg; Hideo Ishikawa; Mike Evans; Klaus Palme
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-19       Impact factor: 11.205

5.  Gravity-induced PIN transcytosis for polarization of auxin fluxes in gravity-sensing root cells.

Authors:  Jürgen Kleine-Vehn; Zhaojun Ding; Angharad R Jones; Masao Tasaka; Miyo T Morita; Jirí Friml
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-06       Impact factor: 11.205

Review 6.  A guide to choosing fluorescent proteins.

Authors:  Nathan C Shaner; Paul A Steinbach; Roger Y Tsien
Journal:  Nat Methods       Date:  2005-12       Impact factor: 28.547

Review 7.  Mechanism of auxin-regulated gene expression in plants.

Authors:  Elisabeth J Chapman; Mark Estelle
Journal:  Annu Rev Genet       Date:  2009       Impact factor: 16.830

8.  An intelligent multi-restart memetic algorithm for box constrained global optimisation.

Authors:  J Sun; J M Garibaldi; N Krasnogor; Q Zhang
Journal:  Evol Comput       Date:  2012-03-12       Impact factor: 3.277

9.  Amyloplast sedimentation kinetics in gravistimulated maize roots.

Authors:  F D Sack; M M Suyemoto; A C Leopold
Journal:  Planta       Date:  1985       Impact factor: 4.116

10.  Root gravitropism requires lateral root cap and epidermal cells for transport and response to a mobile auxin signal.

Authors:  Ranjan Swarup; Eric M Kramer; Paula Perry; Kirsten Knox; H M Ottoline Leyser; Jim Haseloff; Gerrit T S Beemster; Rishikesh Bhalerao; Malcolm J Bennett
Journal:  Nat Cell Biol       Date:  2005-11       Impact factor: 28.824

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  105 in total

1.  Ubiquitin-mediated control of plant hormone signaling.

Authors:  Dior R Kelley; Mark Estelle
Journal:  Plant Physiol       Date:  2012-06-21       Impact factor: 8.340

Review 2.  Molecular mechanisms of gravity perception and signal transduction in plants.

Authors:  Yaroslav S Kolesnikov; Serhiy V Kretynin; Igor D Volotovsky; Elizabeth L Kordyum; Eric Ruelland; Volodymyr S Kravets
Journal:  Protoplasma       Date:  2015-07-28       Impact factor: 3.356

Review 3.  Genetic control of root growth: from genes to networks.

Authors:  Radka Slovak; Takehiko Ogura; Santosh B Satbhai; Daniela Ristova; Wolfgang Busch
Journal:  Ann Bot       Date:  2015-11-11       Impact factor: 4.357

Review 4.  Root systems biology: integrative modeling across scales, from gene regulatory networks to the rhizosphere.

Authors:  Kristine Hill; Silvana Porco; Guillaume Lobet; Susan Zappala; Sacha Mooney; Xavier Draye; Malcolm J Bennett
Journal:  Plant Physiol       Date:  2013-10-18       Impact factor: 8.340

5.  A Strategy to Validate the Role of Callose-mediated Plasmodesmal Gating in the Tropic Response.

Authors:  Ritesh Kumar; Shu Wei Wu; Arya Bagus Boedi Iswanto; Dhinesh Kumar; Xiao Han; Jae-Yean Kim
Journal:  J Vis Exp       Date:  2016-04-17       Impact factor: 1.355

6.  Localized auxin peaks in concentration-based transport models of the shoot apical meristem.

Authors:  Delphine Draelants; Daniele Avitabile; Wim Vanroose
Journal:  J R Soc Interface       Date:  2015-05-06       Impact factor: 4.118

7.  Bimodal regulation of ICR1 levels generates self-organizing auxin distribution.

Authors:  Ora Hazak; Uri Obolski; Tomáš Prat; Jiří Friml; Lilach Hadany; Shaul Yalovsky
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-02       Impact factor: 11.205

8.  Root Gravitropism Is Regulated by a Crosstalk between para-Aminobenzoic Acid, Ethylene, and Auxin.

Authors:  Hugues Nziengui; Hanna Lasok; Philip Kochersperger; Benedetto Ruperti; Fabrice Rébeillé; Klaus Palme; Franck Anicet Ditengou
Journal:  Plant Physiol       Date:  2018-10-01       Impact factor: 8.340

9.  Light-dependent gravitropism and negative phototropism of inflorescence stems in a dominant Aux/IAA mutant of Arabidopsis thaliana, axr2.

Authors:  Atsuko Sato; Shu Sasaki; Jun Matsuzaki; Kotaro T Yamamoto
Journal:  J Plant Res       Date:  2014-06-18       Impact factor: 2.629

Review 10.  Abscisic acid and other plant hormones: Methods to visualize distribution and signaling.

Authors:  Rainer Waadt; Po-Kai Hsu; Julian I Schroeder
Journal:  Bioessays       Date:  2015-12       Impact factor: 4.345

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