Literature DB >> 22390271

Mixing properties of sphingomyelin ceramide bilayers: a simulation study.

Rainer Metcalf1, Sagar A Pandit.   

Abstract

Ceramide is the simplest molecule in the class of glycosphingolipids composed of a sphingosine backbone and acyl moiety. It plays significant roles in cell signaling; apoptosis; binding of hormones, toxins, and viruses; and many other biologically important functions. Sphingomyelin, ceramide with a phosphotidylcholine headgroup, is another biologically vital lipid present in the myelin sheath of nerve cell axons. Regions with high concentrations of ceramide can be formed in biological membranes composed of sphingomyelin by enzymatic catalysis with sphingomyelinase. To better understand the biophysical and thermodynamic properties of these molecules and their mixtures, we have preformed NPT molecular dynamics simulations of hydrated 16:0 sphingomyelin bilayers with increasing concentrations of 16:0 ceramide at 323, 332, 340, and 358 K. From analyses of electron densities, hydrogen bonding, NMR order parameters, partial molecular volume, and partial molecular area, we have identified possible structural changes corresponding to liquid ordered and liquid disordered phases. These structural changes are the results of changes in intra- and intermolecular hydrogen bonds between SM and Cer molecules. Our results correspond to DSC experiments for sphingomyelin bilayer concentrations up to 50% Cer. Above 50% concentration, we observe conformational changes in the SM headgroup similar to that of the umbrella model for lipid cholesterol mixtures.

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Year:  2012        PMID: 22390271      PMCID: PMC3350751          DOI: 10.1021/jp212325e

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  46 in total

Review 1.  De novo sphingolipid biosynthesis: a necessary, but dangerous, pathway.

Authors:  Alfred H Merrill
Journal:  J Biol Chem       Date:  2002-05-13       Impact factor: 5.157

Review 2.  The therapeutic potential of modulating the ceramide/sphingomyelin pathway.

Authors:  Richard Kolesnick
Journal:  J Clin Invest       Date:  2002-07       Impact factor: 14.808

3.  Effect of the structure of natural sterols and sphingolipids on the formation of ordered sphingolipid/sterol domains (rafts). Comparison of cholesterol to plant, fungal, and disease-associated sterols and comparison of sphingomyelin, cerebrosides, and ceramide.

Authors:  X Xu; R Bittman; G Duportail; D Heissler; C Vilcheze; E London
Journal:  J Biol Chem       Date:  2001-06-29       Impact factor: 5.157

4.  Molecular dynamics simulations of bilayers containing mixtures of sphingomyelin with cholesterol and phosphatidylcholine with cholesterol.

Authors:  Zhancheng Zhang; Shreyas Y Bhide; Max L Berkowitz
Journal:  J Phys Chem B       Date:  2007-10-17       Impact factor: 2.991

5.  Impaired cutaneous permeability barrier function, skin hydration, and sphingomyelinase activity in keratin 10 deficient mice.

Authors:  J M Jensen; S Schütze; C Neumann; E Proksch
Journal:  J Invest Dermatol       Date:  2000-10       Impact factor: 8.551

6.  Cholesterol precursors stabilize ordinary and ceramide-rich ordered lipid domains (lipid rafts) to different degrees. Implications for the Bloch hypothesis and sterol biosynthesis disorders.

Authors:  Omar Bakht; Erwin London
Journal:  J Biol Chem       Date:  2006-05-30       Impact factor: 5.157

Review 7.  Structure of lipid bilayers.

Authors:  J F Nagle; S Tristram-Nagle
Journal:  Biochim Biophys Acta       Date:  2000-11-10

8.  The effect of ceramide on phosphatidylcholine membranes: a deuterium NMR study.

Authors:  Ya-Wei Hsueh; Ralph Giles; Neil Kitson; Jenifer Thewalt
Journal:  Biophys J       Date:  2002-06       Impact factor: 4.033

9.  Effect of ceramide N-acyl chain and polar headgroup structure on the properties of ordered lipid domains (lipid rafts).

Authors:  Peter Sawatzki; Thomas Kolter; Robert Bittman; Erwin London
Journal:  Biochim Biophys Acta       Date:  2007-05-13

10.  Cholesterol surrogates: a comparison of cholesterol and 16:0 ceramide in POPC bilayers.

Authors:  Sagar A Pandit; See-Wing Chiu; Eric Jakobsson; Ananth Grama; H L Scott
Journal:  Biophys J       Date:  2006-10-27       Impact factor: 4.033

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  11 in total

1.  Theoretical investigations into the intermolecular hydrogen-bonding interactions of N-(hydroxymethyl)acetamide dimers.

Authors:  Hai-Fei Tang; Hua Zhong; Ling-Ling Zhang; Ming-Xing Gong; Shu-Qin Song; Qing-Ping Tian
Journal:  J Mol Model       Date:  2018-05-31       Impact factor: 1.810

2.  Simulation study of the structure and phase behavior of ceramide bilayers and the role of lipid head group chemistry.

Authors:  Shan Guo; Timothy C Moore; Christopher R Iacovella; L Anderson Strickland; Clare McCabe
Journal:  J Chem Theory Comput       Date:  2013-11-12       Impact factor: 6.006

3.  CHARMM all-atom additive force field for sphingomyelin: elucidation of hydrogen bonding and of positive curvature.

Authors:  Richard M Venable; Alexander J Sodt; Brent Rogaski; Huan Rui; Elizabeth Hatcher; Alexander D MacKerell; Richard W Pastor; Jeffery B Klauda
Journal:  Biophys J       Date:  2014-07-01       Impact factor: 4.033

4.  Molecular Structure of Sphingomyelin in Fluid Phase Bilayers Determined by the Joint Analysis of Small-Angle Neutron and X-ray Scattering Data.

Authors:  Milka Doktorova; Norbert Kučerka; Jacob J Kinnun; Jianjun Pan; Drew Marquardt; Haden L Scott; Richard M Venable; Richard W Pastor; Stephen R Wassall; John Katsaras; Frederick A Heberle
Journal:  J Phys Chem B       Date:  2020-06-16       Impact factor: 2.991

5.  A Coarse-Grained Model of Stratum Corneum Lipids: Free Fatty Acids and Ceramide NS.

Authors:  Timothy C Moore; Christopher R Iacovella; Remco Hartkamp; Annette L Bunge; Clare McCabe
Journal:  J Phys Chem B       Date:  2016-09-09       Impact factor: 2.991

6.  Effects of sphingomyelin headgroup size on interactions with ceramide.

Authors:  Ibai Artetxe; Christian Sergelius; Mayuko Kurita; Shou Yamaguchi; Shigeo Katsumura; J Peter Slotte; Terhi Maula
Journal:  Biophys J       Date:  2013-02-05       Impact factor: 4.033

7.  Insights into sphingolipid miscibility: separate observation of sphingomyelin and ceramide N-acyl chain melting.

Authors:  Sherry S W Leung; Jon V Busto; Amir Keyvanloo; Félix M Goñi; Jenifer Thewalt
Journal:  Biophys J       Date:  2012-12-18       Impact factor: 4.033

8.  Neutron diffraction studies of oral stratum corneum model lipid membranes.

Authors:  Natalia Yu Ryabova; Stanislav G Sheverev; Thomas Hauß
Journal:  Eur Biophys J       Date:  2013-06-01       Impact factor: 1.733

9.  Ceramide-lipid interactions studied by MD simulations and solid-state NMR.

Authors:  Bercem Dutagaci; Johanna Becker-Baldus; José D Faraldo-Gómez; Clemens Glaubitz
Journal:  Biochim Biophys Acta       Date:  2014-05-29

Review 10.  Anandamide Revisited: How Cholesterol and Ceramides Control Receptor-Dependent and Receptor-Independent Signal Transmission Pathways of a Lipid Neurotransmitter.

Authors:  Coralie Di Scala; Jacques Fantini; Nouara Yahi; Francisco J Barrantes; Henri Chahinian
Journal:  Biomolecules       Date:  2018-05-22
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