Literature DB >> 22374952

Genome sequence of the soybean symbiont Sinorhizobium fredii HH103.

Stefan Weidner1, Anke Becker, Ildefonso Bonilla, Sebastian Jaenicke, Javier Lloret, Isabel Margaret, Alfred Pühler, José E Ruiz-Sainz, Susanne Schneiker-Bekel, Rafael Szczepanowski, José María Vinardell, Susanne Zehner, Michael Göttfert.   

Abstract

Sinorhizobium fredii HH103 is a fast-growing rhizobial strain that is able to nodulate legumes that develop determinate nodules, e.g., soybean, and legumes that form nodules of the indeterminate type. Here we present the genome of HH103, which consists of one chromosome and five plasmids with a total size of 7.22 Mb.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22374952      PMCID: PMC3294874          DOI: 10.1128/JB.06729-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  9 in total

1.  GenDB--an open source genome annotation system for prokaryote genomes.

Authors:  Folker Meyer; Alexander Goesmann; Alice C McHardy; Daniela Bartels; Thomas Bekel; Jörn Clausen; Jörn Kalinowski; Burkhard Linke; Oliver Rupp; Robert Giegerich; Alfred Pühler
Journal:  Nucleic Acids Res       Date:  2003-04-15       Impact factor: 16.971

2.  Phylogenetic and genetic relationships of Mesorhizobium tianshanense and related rhizobia.

Authors:  Z Y Tan; X D Xu; E T Wang; J L Gao; E Martinez-Romero; W X Chen
Journal:  Int J Syst Bacteriol       Date:  1997-07

3.  Predominance of Fast-Growing Rhizobium japonicum in a Soybean Field in the People's Republic of China.

Authors:  S F Dowdle; B B Bohlool
Journal:  Appl Environ Microbiol       Date:  1985-11       Impact factor: 4.792

4.  Consed: a graphical tool for sequence finishing.

Authors:  D Gordon; C Abajian; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

Review 5.  Symbiotic properties and first analyses of the genomic sequence of the fast growing model strain Sinorhizobium fredii HH103 nodulating soybean.

Authors:  Isabel Margaret; Anke Becker; Jochen Blom; Ildefonso Bonilla; Alexander Goesmann; Michael Göttfert; Javier Lloret; Virginie Mittard-Runte; Christian Rückert; José E Ruiz-Sainz; José María Vinardell; Stefan Weidner
Journal:  J Biotechnol       Date:  2011-03-30       Impact factor: 3.307

6.  Genetic diversity of nodulating and non-nodulating rhizobia associated with wild soybean (Glycine soja Sieb. & Zucc.) in different ecoregions of China.

Authors:  Li Juan Wu; Hai Qing Wang; En Tao Wang; Wen Xin Chen; Chang Fu Tian
Journal:  FEMS Microbiol Ecol       Date:  2011-03-14       Impact factor: 4.194

7.  A purL mutant of Sinorhizobium fredii HH103 is symbiotically defective and altered in its lipopolysaccharide.

Authors:  Ana M Buendía-Clavería; Ahmed Moussaid; F Javier Ollero; José M Vinardell; Antonio Torres; Javier Moreno; Antonio M Gil-Serrano; Miguel A Rodríguez-Carvajal; Pilar Tejero-Mateo; Jan L Peart; Nicholas J Brewin; José E Ruiz-Sainz
Journal:  Microbiology       Date:  2003-07       Impact factor: 2.777

8.  Versatile and open software for comparing large genomes.

Authors:  Stefan Kurtz; Adam Phillippy; Arthur L Delcher; Michael Smoot; Martin Shumway; Corina Antonescu; Steven L Salzberg
Journal:  Genome Biol       Date:  2004-01-30       Impact factor: 13.583

9.  Genetic diversity of fast-growing rhizobia that nodulate soybean ( Glycine max L. Merr).

Authors:  Gustavo Saldaña; Virginia Martinez-Alcántara; José M Vinardell; Ramón Bellogín; José E Ruíz-Sainz; Pedro Alberto Balatti
Journal:  Arch Microbiol       Date:  2003-06-07       Impact factor: 2.552

  9 in total
  19 in total

1.  Complete genome sequence of the broad-host-range strain Sinorhizobium fredii USDA257.

Authors:  Jørg Schuldes; Mariita Rodriguez Orbegoso; Christel Schmeisser; Hari B Krishnan; Rolf Daniel; Wolfgang R Streit
Journal:  J Bacteriol       Date:  2012-08       Impact factor: 3.490

2.  Spatial Divergence of PHR-PHT1 Modules Maintains Phosphorus Homeostasis in Soybean Nodules.

Authors:  Mingyang Lu; Zhiyuan Cheng; Xiao-Mei Zhang; Penghui Huang; Chengming Fan; Guolong Yu; Fulu Chen; Kun Xu; Qingshan Chen; Yuchen Miao; Yuzhen Han; Xianzhong Feng; Liangyu Liu; Yong-Fu Fu
Journal:  Plant Physiol       Date:  2020-07-17       Impact factor: 8.340

3.  Genetic Analysis Reveals the Essential Role of Nitrogen Phosphotransferase System Components in Sinorhizobium fredii CCBAU 45436 Symbioses with Soybean and Pigeonpea Plants.

Authors:  Yue Zhen Li; Dan Wang; Xue Ying Feng; Jian Jiao; Wen Xin Chen; Chang Fu Tian
Journal:  Appl Environ Microbiol       Date:  2015-12-18       Impact factor: 4.792

4.  Draft genome sequence of the bean-nodulating Sinorhizobium fredii strain GR64.

Authors:  Gonzalo Torres Tejerizo; Luis Lozano; Víctor González; Patricia Bustos; David Romero; Susana Brom
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

5.  The tRNAarg gene and engA are essential genes on the 1.7-Mb pSymB megaplasmid of Sinorhizobium meliloti and were translocated together from the chromosome in an ancestral strain.

Authors:  George diCenzo; Branislava Milunovic; Jiujun Cheng; Turlough M Finan
Journal:  J Bacteriol       Date:  2012-11-02       Impact factor: 3.490

6.  A set of Lotus japonicus Gifu x Lotus burttii recombinant inbred lines facilitates map-based cloning and QTL mapping.

Authors:  Niels Sandal; Haojie Jin; Dulce Nombre Rodriguez-Navarro; Francisco Temprano; Cristina Cvitanich; Andreas Brachmann; Shusei Sato; Masayoshi Kawaguchi; Satoshi Tabata; Martin Parniske; Jose E Ruiz-Sainz; Stig U Andersen; Jens Stougaard
Journal:  DNA Res       Date:  2012-05-22       Impact factor: 4.458

7.  The Sinorhizobium fredii HH103 lipopolysaccharide is not only relevant at early soybean nodulation stages but also for symbiosome stability in mature nodules.

Authors:  Isabel Margaret; M Mercedes Lucas; Sebastián Acosta-Jurado; Ana M Buendía-Clavería; Elena Fedorova; Ángeles Hidalgo; Miguel A Rodríguez-Carvajal; Dulce N Rodriguez-Navarro; José E Ruiz-Sainz; José M Vinardell
Journal:  PLoS One       Date:  2013-10-01       Impact factor: 3.240

Review 8.  Commonalities and differences of T3SSs in rhizobia and plant pathogenic bacteria.

Authors:  Anastasia P Tampakaki
Journal:  Front Plant Sci       Date:  2014-03-27       Impact factor: 5.753

9.  Comparative genomics of the core and accessory genomes of 48 Sinorhizobium strains comprising five genospecies.

Authors:  Masayuki Sugawara; Brendan Epstein; Brian D Badgley; Tatsuya Unno; Lei Xu; Jennifer Reese; Prasad Gyaneshwar; Roxanne Denny; Joann Mudge; Arvind K Bharti; Andrew D Farmer; Gregory D May; Jimmy E Woodward; Claudine Médigue; David Vallenet; Aurélie Lajus; Zoé Rouy; Betsy Martinez-Vaz; Peter Tiffin; Nevin D Young; Michael J Sadowsky
Journal:  Genome Biol       Date:  2013-02-20       Impact factor: 13.583

10.  Divergent nod-containing Bradyrhizobium sp. DOA9 with a megaplasmid and its host range.

Authors:  Kamonluck Teamtisong; Pongpan Songwattana; Rujirek Noisangiam; Pongdet Piromyou; Nantakorn Boonkerd; Panlada Tittabutr; Kiwamu Minamisawa; Achara Nantagij; Shin Okazaki; Mikiko Abe; Toshiki Uchiumi; Neung Teaumroong
Journal:  Microbes Environ       Date:  2014-10-04       Impact factor: 2.912

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.