Literature DB >> 23209231

Draft genome sequence of the bean-nodulating Sinorhizobium fredii strain GR64.

Gonzalo Torres Tejerizo1, Luis Lozano, Víctor González, Patricia Bustos, David Romero, Susana Brom.   

Abstract

Sinorhizobium fredii GR64 is a peculiar strain that is able to effectively nodulate bean but not soybean, the common host of S. fredii. Here we present the draft genome of S. fredii GR64. This information will contribute to a better understanding of the symbiotic rhizobium-plant interaction and of rhizobial evolution.

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Year:  2012        PMID： 23209231      PMCID： PMC3510590          DOI： 10.1128/JB.01882-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  9 in total

1.  De novo assembly of human genomes with massively parallel short read sequencing.

Authors:  Ruiqiang Li; Hongmei Zhu; Jue Ruan; Wubin Qian; Xiaodong Fang; Zhongbin Shi; Yingrui Li; Shengting Li; Gao Shan; Karsten Kristiansen; Songgang Li; Huanming Yang; Jian Wang; Jun Wang
Journal:  Genome Res       Date:  2009-12-17       Impact factor: 9.043

Review 2.  A genomic perspective on protein families.

Authors:  R L Tatusov; E V Koonin; D J Lipman
Journal:  Science       Date:  1997-10-24       Impact factor: 47.728

3.  Complete genome sequence of the broad-host-range strain Sinorhizobium fredii USDA257.

Authors:  Jørg Schuldes; Mariita Rodriguez Orbegoso; Christel Schmeisser; Hari B Krishnan; Rolf Daniel; Wolfgang R Streit
Journal:  J Bacteriol       Date:  2012-08       Impact factor: 3.490

4.  Genome sequence of the soybean symbiont Sinorhizobium fredii HH103.

Authors:  Stefan Weidner; Anke Becker; Ildefonso Bonilla; Sebastian Jaenicke; Javier Lloret; Isabel Margaret; Alfred Pühler; José E Ruiz-Sainz; Susanne Schneiker-Bekel; Rafael Szczepanowski; José María Vinardell; Susanne Zehner; Michael Göttfert
Journal:  J Bacteriol       Date:  2012-03       Impact factor: 3.490

5.  The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons.

Authors:  Víctor González; Rosa I Santamaría; Patricia Bustos; Ismael Hernández-González; Arturo Medrano-Soto; Gabriel Moreno-Hagelsieb; Sarath Chandra Janga; Miguel A Ramírez; Verónica Jiménez-Jacinto; Julio Collado-Vides; Guillermo Dávila
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-27       Impact factor: 11.205

6.  Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems.

Authors:  Christel Schmeisser; Heiko Liesegang; Dagmar Krysciak; Nadia Bakkou; Antoine Le Quéré; Antje Wollherr; Isabelle Heinemeyer; Burkhard Morgenstern; Andreas Pommerening-Röser; Margarita Flores; Rafael Palacios; Sydney Brenner; Gerhard Gottschalk; Ruth A Schmitz; William J Broughton; Xavier Perret; Axel W Strittmatter; Wolfgang R Streit
Journal:  Appl Environ Microbiol       Date:  2009-04-17       Impact factor: 4.792

7.  The conjugative plasmid of a bean-nodulating Sinorhizobium fredii strain is assembled from sequences of two Rhizobium plasmids and the chromosome of a Sinorhizobium strain.

Authors:  Laura Cervantes; Patricia Bustos; Lourdes Girard; Rosa Isela Santamaría; Guillermo Dávila; Pablo Vinuesa; David Romero; Susana Brom
Journal:  BMC Microbiol       Date:  2011-06-25       Impact factor: 3.605

8.  r2cat: synteny plots and comparative assembly.

Authors:  Peter Husemann; Jens Stoye
Journal:  Bioinformatics       Date:  2009-12-16       Impact factor: 6.937

9.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
  9 in total
  1 in total

1.  High-quality permanent draft genome sequence of Ensifer meliloti strain 4H41, an effective salt- and drought-tolerant microsymbiont of Phaseolus vulgaris.

Authors:  Ridha Mhamdi; Julie Ardley; Rui Tian; Rekha Seshadri; T B K Reddy; Amrita Pati; Tanja Woyke; Victor Markowitz; Natalia Ivanova; Nikos Kyrpides; Wayne Reeve
Journal:  Stand Genomic Sci       Date:  2015-07-02
  1 in total

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