Literature DB >> 22373603

Oligomerization of glycine and alanine catalyzed by iron oxides: implications for prebiotic chemistry.

Uma Shanker1, Brij Bhushan, G Bhattacharjee.   

Abstract

Iron oxide minerals are probable constituents of the sediments present in geothermal regions of the primitive earth. They might have adsorbed different organic monomers (amino acids, nucleotides etc.) and catalyzed polymerization processes leading to the formation of the first living cell. In the present work we tested the catalytic activity of three forms of iron oxides (Goethite, Akaganeite and Hematite) in the intermolecular condensation of each of the amino acids glycine and L-alanine. The effect of zinc oxide and titanium dioxide on the oligomerization has also been studied. Oligomerization studies were performed for 35 days at three different temperatures 50, 90 and 120°C without applying drying/wetting cycling. The products formed were characterized by HPLC and ESI-MS techniques. All three forms of iron oxides catalyzed peptide bond formation (23.2% of gly2 and 10.65% of ala2). The reaction was monitored every 7 days. Formation of peptides was observed to start after 7 days at 50°C. Maximum yield of peptides was found after 35 days at 90°C. Reaction at 120°C favors formation of diketopiperazine derivatives. It is also important to note that after 35 days of reaction, goethite produced dimer and trimer with the highest yield among the oxides tested. We suggest that the activity of goethite could probably be due to its high surface area and surface acidity.

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Year:  2012        PMID: 22373603     DOI: 10.1007/s11084-012-9266-5

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  13 in total

1.  The effect of smectite composition on the catalysis of peptide bond formation.

Authors:  J Bujdák; B M Rode
Journal:  J Mol Evol       Date:  1996-10       Impact factor: 2.395

2.  Formation of nucleobases from formamide in the presence of iron oxides: implication in chemical evolution and origin of life.

Authors:  Uma Shanker; Brij Bhushan; G Bhattacharjee
Journal:  Astrobiology       Date:  2011-04-11       Impact factor: 4.335

3.  Silica, alumina and clay catalyzed peptide bond formation: enhanced efficiency of alumina catalyst.

Authors:  J Bujdák; B M Rode
Journal:  Orig Life Evol Biosph       Date:  1999-10       Impact factor: 1.950

4.  Peptide formation in the prebiotic era: thermal condensation of glycine in fluctuating clay environments.

Authors:  N Lahav; D White; S Chang
Journal:  Science       Date:  1978-07-07       Impact factor: 47.728

5.  Chemical evolution and the evolution of the earth's crust.

Authors:  D E Ingmanson; M J Dowler
Journal:  Orig Life       Date:  1977-10

6.  Modelling of the prebiotic synthesis of oligopeptides: silicate catalysts help to overcome the critical stage.

Authors:  K I Zamaraev; V N Romannikov; R I Salganik; W A Wlassoff; V V Khramtsov
Journal:  Orig Life Evol Biosph       Date:  1997-08       Impact factor: 1.950

7.  The combination of salt induced peptide formation reaction and clay catalysis: a way to higher peptides under primitive earth conditions.

Authors:  B M Rode; H L Son; Y Suwannachot
Journal:  Orig Life Evol Biosph       Date:  1999-05       Impact factor: 1.950

8.  Biochemical evolution. I. Polymerization On internal, organophilic silica surfaces of dealuminated zeolites and feldspars.

Authors:  J V Smith
Journal:  Proc Natl Acad Sci U S A       Date:  1998-03-31       Impact factor: 11.205

9.  Site-specific prebiotic oligomerization reactions of glycine on the surface of hectorite.

Authors:  T L Porter; M P Eastman; M E Hagerman; L B Price; R F Shand
Journal:  J Mol Evol       Date:  1998-10       Impact factor: 2.395

10.  Properties of synthetic ferrihydrite as an amino acid adsorbent and a promoter of peptide bond formation.

Authors:  G Matrajt; D Blanot
Journal:  Amino Acids       Date:  2003-10-17       Impact factor: 3.520

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  12 in total

1.  Surface interaction of L-alanine on hematite: an astrobiological implication.

Authors:  Pramod Pandey; Chandra Kala Pant; Kavita Gururani; Priyanka Arora; Sumit Kumar; Yogesh Sharma; Hari Datt Pathak; Mohan Singh Mehata
Journal:  Orig Life Evol Biosph       Date:  2014-01-09       Impact factor: 1.950

2.  Water-assisted peptide bond formation between two double amino acid molecules in the gas phase.

Authors:  Sylwia Freza
Journal:  J Mol Model       Date:  2019-06-07       Impact factor: 1.810

3.  Glycine Polymerization on Oxide Minerals.

Authors:  Norio Kitadai; Hiroyuki Oonishi; Koichiro Umemoto; Tomohiro Usui; Keisuke Fukushi; Satoru Nakashima
Journal:  Orig Life Evol Biosph       Date:  2016-07-29       Impact factor: 1.950

4.  The Influence of Mineral Matrices on the Thermal Behavior of Glycine.

Authors:  Punam Dalai; Hannes Lukas Pleyer; Henry Strasdeit; Stefan Fox
Journal:  Orig Life Evol Biosph       Date:  2016-10-18       Impact factor: 1.950

5.  Role of ferrocyanides in the prebiotic synthesis of α-amino acids.

Authors:  Marta Ruiz-Bermejo; Susana Osuna-Esteban; María-Paz Zorzano
Journal:  Orig Life Evol Biosph       Date:  2013-06-19       Impact factor: 1.950

6.  The Effect of Goethites on the Polymerization of Glycine and Alanine Under Prebiotic Chemistry Conditions.

Authors:  João Paulo T Baú; Cristine E A Carneiro; Antônio Carlos S da Costa; Daniel F Valezi; Eduardo di Mauro; Eduardo Pilau; Dimas A M Zaia
Journal:  Orig Life Evol Biosph       Date:  2022-01-22       Impact factor: 1.120

7.  Ester-Mediated Amide Bond Formation Driven by Wet-Dry Cycles: A Possible Path to Polypeptides on the Prebiotic Earth.

Authors:  Jay G Forsythe; Sheng-Sheng Yu; Irena Mamajanov; Martha A Grover; Ramanarayanan Krishnamurthy; Facundo M Fernández; Nicholas V Hud
Journal:  Angew Chem Int Ed Engl       Date:  2015-07-15       Impact factor: 15.336

8.  Genomics and physiology of a marine flavobacterium encoding a proteorhodopsin and a xanthorhodopsin-like protein.

Authors:  Thomas Riedel; Laura Gómez-Consarnau; Jürgen Tomasch; Madeleine Martin; Michael Jarek; José M González; Stefan Spring; Meike Rohlfs; Thorsten Brinkhoff; Heribert Cypionka; Markus Göker; Anne Fiebig; Johannes Klein; Alexander Goesmann; Jed A Fuhrman; Irene Wagner-Döbler
Journal:  PLoS One       Date:  2013-03-04       Impact factor: 3.240

9.  Role of the Interchangeable Cations on the Sorption of Fumaric and Succinic Acids on Montmorillonite and its Relevance in Prebiotic Chemistry.

Authors:  A Meléndez-López; M Colín-García; F Ortega-Gutiérrez; J Cruz-Castañeda
Journal:  Orig Life Evol Biosph       Date:  2021-07-12       Impact factor: 1.120

10.  Formation of oligopeptides in high yield under simple programmable conditions.

Authors:  Marc Rodriguez-Garcia; Andrew J Surman; Geoffrey J T Cooper; Irene Suárez-Marina; Zied Hosni; Michael P Lee; Leroy Cronin
Journal:  Nat Commun       Date:  2015-10-07       Impact factor: 14.919

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