Literature DB >> 22367361

Replication study for reported SNP associations with breast cancer survival.

Alicia Beeghly-Fadiel1, Wei Zheng, Wei Lu, Jirong Long, Ying Zheng, Hui Cai, Kai Gu, Zhi Chen, Qiuyin Cai, Yu-Tang Gao, Xiao Ou Shu.   

Abstract

PURPOSE: Nine previously reported associations between single nucleotide polymorphisms (SNPs) and breast cancer outcomes from the Shanghai Breast Cancer Study (Stage 1) were further evaluated in relation to disease-free survival (DFS) and overall survival (OS) among 5,192 additional breast cancer patients (Stage 2).
METHODS: Hazard ratios (HR) and 95% confidence intervals (CI) were calculated by proportional hazards regression in models adjusted for age, disease stage, estrogen and progesterone receptor status, and treatment regimens.
RESULTS: Two SNPs had generally consistent results and significant associations with OS in combined analyses. Compared to women with MMP7 rs11225297 AA genotypes, OS was moderately better for women with AT genotypes (HR: 0.8, 95% CI: 0.7-1.0) and much better for women with TT genotypes (HR: 0.4, 95% CI: 0.2-0.8). Compared to women with MMP8 rs11225395 CC genotypes, OS was slightly better for women with CT genotypes (HR: 0.9, 95% CI: 0.7-1.1) and moderately better for women with TT genotypes (HR: 0.6, 95% CI: 0.4-0.9). Joint analysis showed significant dose-response relationships with increasing numbers of rare alleles for both OS (p < 0.001) and DFS (p = 0.001).
CONCLUSIONS: A functional variant in MMP8 and a SNP in high linkage disequilibrium with a functional variant in MMP7 were significantly associated with breast cancer survival in a large two-stage survival study among Chinese women. This supports the hypothesis that SNPs in matrix metalloproteinase genes may influence breast cancer prognosis; additional research on these and other SNPs in genes important in metastasis, angiogenesis, and the regulation of the tumor microenvironment is warranted.

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Year:  2012        PMID: 22367361      PMCID: PMC3810152          DOI: 10.1007/s00432-012-1174-6

Source DB:  PubMed          Journal:  J Cancer Res Clin Oncol        ISSN: 0171-5216            Impact factor:   4.553


  24 in total

1.  Joint analysis is more efficient than replication-based analysis for two-stage genome-wide association studies.

Authors:  Andrew D Skol; Laura J Scott; Gonçalo R Abecasis; Michael Boehnke
Journal:  Nat Genet       Date:  2006-01-15       Impact factor: 38.330

2.  Functional plasminogen activator inhibitor-1 gene variants and breast cancer survival.

Authors:  Xianglan Zhang; Xiao-Ou Shu; Qiuyin Cai; ZhiXian Ruan; Yu-Tang Gao; Wei Zheng
Journal:  Clin Cancer Res       Date:  2006-10-15       Impact factor: 12.531

Review 3.  The other side of MMPs: protective roles in tumor progression.

Authors:  Michelle D Martin; Lynn M Matrisian
Journal:  Cancer Metastasis Rev       Date:  2007-12       Impact factor: 9.264

4.  Genome-wide association study identifies a new breast cancer susceptibility locus at 6q25.1.

Authors:  Wei Zheng; Jirong Long; Yu-Tang Gao; Chun Li; Ying Zheng; Yong-Bin Xiang; Wanqing Wen; Shawn Levy; Sandra L Deming; Jonathan L Haines; Kai Gu; Alecia Malin Fair; Qiuyin Cai; Wei Lu; Xiao-Ou Shu
Journal:  Nat Genet       Date:  2009-02-15       Impact factor: 38.330

5.  Common polymorphisms in the prostaglandin pathway genes and their association with breast cancer susceptibility and survival.

Authors:  Jean E Abraham; Patricia Harrington; Kristy E Driver; Jonathan Tyrer; Douglas F Easton; Alison M Dunning; Paul D P Pharoah
Journal:  Clin Cancer Res       Date:  2009-03-10       Impact factor: 12.531

6.  Genetic polymorphisms in the MMP-7 gene and breast cancer survival.

Authors:  Alicia Beeghly-Fadiel; Xiao-Ou Shu; Jirong Long; Chun Li; Qiuyin Cai; Hui Cai; Yu-Tang Gao; Wei Zheng
Journal:  Int J Cancer       Date:  2009-01-01       Impact factor: 7.396

7.  Association of matrix metalloproteinase-8 gene variation with breast cancer prognosis.

Authors:  Julie Decock; Ji-Rong Long; Ross C Laxton; Xiao-Ou Shu; Conrad Hodgkinson; Wouter Hendrickx; Eve G Pearce; Yu-Tang Gao; Andresa C Pereira; Robert Paridaens; Wei Zheng; Shu Ye
Journal:  Cancer Res       Date:  2007-11-01       Impact factor: 12.701

8.  Common MMP-7 polymorphisms and breast cancer susceptibility: a multistage study of association and functionality.

Authors:  Alicia Beeghly-Fadiel; Ji-Rong Long; Yu-Tang Gao; Chun Li; Shimian Qu; Qiuyin Cai; Ying Zheng; Zhi-Xian Ruan; Shawn E Levy; Sandra L Deming; Jay R Snoddy; Xiao-Ou Shu; Wei Lu; Wei Zheng
Journal:  Cancer Res       Date:  2008-07-22       Impact factor: 12.701

9.  Plasma MMP1 and MMP8 expression in breast cancer: protective role of MMP8 against lymph node metastasis.

Authors:  Julie Decock; Wouter Hendrickx; Ulla Vanleeuw; Vanya Van Belle; Sabine Van Huffel; Marie-Rose Christiaens; Shu Ye; Robert Paridaens
Journal:  BMC Cancer       Date:  2008-03-20       Impact factor: 4.430

10.  Effects of common germline genetic variation in cell cycle control genes on breast cancer survival: results from a population-based cohort.

Authors:  Elizabeth M Azzato; Kristy E Driver; Fabienne Lesueur; Mitul Shah; David Greenberg; Douglas F Easton; Andrew E Teschendorff; Carlos Caldas; Neil E Caporaso; Paul D P Pharoah
Journal:  Breast Cancer Res       Date:  2008-05-28       Impact factor: 6.466

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1.  No association between genetic variants in angiogenesis and inflammation pathway genes and breast cancer survival among Chinese women.

Authors:  Tsogzolmaa Dorjgochoo; Ying Zheng; Yu-Tang Gao; Xiangyu Ma; Jirong Long; Pingping Bao; Ben Zhang; Wanqing Wen; Wei Lu; Wei Zheng; Xiao Ou Shu; Alicia Beeghly-Fadiel
Journal:  Cancer Epidemiol       Date:  2013-07-11       Impact factor: 2.984

2.  Common germline polymorphisms associated with breast cancer-specific survival.

Authors:  Ailith Pirie; Qi Guo; Peter Kraft; Sander Canisius; Diana M Eccles; Nazneen Rahman; Heli Nevanlinna; Constance Chen; Sofia Khan; Jonathan Tyrer; Manjeet K Bolla; Qin Wang; Joe Dennis; Kyriaki Michailidou; Michael Lush; Alison M Dunning; Mitul Shah; Kamila Czene; Hatef Darabi; Mikael Eriksson; Dieter Lambrechts; Caroline Weltens; Karin Leunen; Chantal van Ongeval; Børge G Nordestgaard; Sune F Nielsen; Henrik Flyger; Anja Rudolph; Petra Seibold; Dieter Flesch-Janys; Carl Blomqvist; Kristiina Aittomäki; Rainer Fagerholm; Taru A Muranen; Janet E Olsen; Emily Hallberg; Celine Vachon; Julia A Knight; Gord Glendon; Anna Marie Mulligan; Annegien Broeks; Sten Cornelissen; Christopher A Haiman; Brian E Henderson; Frederick Schumacher; Loic Le Marchand; John L Hopper; Helen Tsimiklis; Carmel Apicella; Melissa C Southey; Simon S Cross; Malcolm Wr Reed; Graham G Giles; Roger L Milne; Catriona McLean; Robert Winqvist; Katri Pylkäs; Arja Jukkola-Vuorinen; Mervi Grip; Maartje J Hooning; Antoinette Hollestelle; John Wm Martens; Ans Mw van den Ouweland; Federick Marme; Andreas Schneeweiss; Rongxi Yang; Barbara Burwinkel; Jonine Figueroa; Stephen J Chanock; Jolanta Lissowska; Elinor J Sawyer; Ian Tomlinson; Michael J Kerin; Nicola Miller; Hermann Brenner; Katja Butterbach; Bernd Holleczek; Vesa Kataja; Veli-Matti Kosma; Jaana M Hartikainen; Jingmei Li; Judith S Brand; Keith Humphreys; Peter Devilee; Robert Aem Tollenaar; Caroline Seynaeve; Paolo Radice; Paolo Peterlongo; Siranoush Manoukian; Filomena Ficarazzi; Matthias W Beckmann; Alexander Hein; Arif B Ekici; Rosemary Balleine; Kelly-Anne Phillips; Javier Benitez; M Pilar Zamora; Jose Ignacio Arias Perez; Primitiva Menéndez; Anna Jakubowska; Jan Lubinski; Jacek Gronwald; Katarzyna Durda; Ute Hamann; Maria Kabisch; Hans Ulrich Ulmer; Thomas Rüdiger; Sara Margolin; Vessela Kristensen; Siljie Nord; D Gareth Evans; Jean Abraham; Helena Earl; Christopher J Poole; Louise Hiller; Janet A Dunn; Sarah Bowden; Rose Yang; Daniele Campa; W Ryan Diver; Susan M Gapstur; Mia M Gaudet; Susan Hankinson; Robert N Hoover; Anika Hüsing; Rudolf Kaaks; Mitchell J Machiela; Walter Willett; Myrto Barrdahl; Federico Canzian; Suet-Feung Chin; Carlos Caldas; David J Hunter; Sara Lindstrom; Montserrat Garcia-Closas; Fergus J Couch; Georgia Chenevix-Trench; Arto Mannermaa; Irene L Andrulis; Per Hall; Jenny Chang-Claude; Douglas F Easton; Stig E Bojesen; Angela Cox; Peter A Fasching; Paul Dp Pharoah; Marjanka K Schmidt
Journal:  Breast Cancer Res       Date:  2015-04-22       Impact factor: 6.466

3.  MMP7 and MMP8 genetic polymorphisms in bladder cancer patients.

Authors:  Edyta Wieczorek; Edyta Reszka; Wojciech Wasowicz; Adam Grzegorczyk; Tomasz Konecki; Marek Sosnowski; Zbigniew Jablonowski
Journal:  Cent European J Urol       Date:  2014-01-27

4.  MMP8 polymorphism is associated with susceptibility to osteonecrosis of the femoral head in a Chinese Han population.

Authors:  Feimeng An; Jieli Du; Yuju Cao; Jianping Shi; Yongchang Guo; Tianbo Jin; Jian Li; Junyu Chen; Ping Li; Mei Dong; Guoqiang Wang; Jianzhong Wang
Journal:  Oncotarget       Date:  2017-03-28

5.  The Role of MMP8 in Cancer: A Systematic Review.

Authors:  Krista Juurikka; Georgina S Butler; Tuula Salo; Pia Nyberg; Pirjo Åström
Journal:  Int J Mol Sci       Date:  2019-09-11       Impact factor: 5.923

6.  Identification and functional annotation of genome-wide ER-regulated genes in breast cancer based on ChIP-Seq data.

Authors:  Min Ding; Haiyun Wang; Jiajia Chen; Bairong Shen; Zhonghua Xu
Journal:  Comput Math Methods Med       Date:  2012-12-31       Impact factor: 2.238

7.  Association of cellular and molecular responses in the rat mammary gland to 17β-estradiol with susceptibility to mammary cancer.

Authors:  Lina Ding; Yang Zhao; Christopher L Warren; Ruth Sullivan; Kevin W Eliceiri; James D Shull
Journal:  BMC Cancer       Date:  2013-12-05       Impact factor: 4.430

  7 in total

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