Literature DB >> 22367031

Serial founder effects during range expansion: a spatial analog of genetic drift.

Montgomery Slatkin1, Laurent Excoffier.   

Abstract

Range expansions cause a series of founder events. We show that, in a one-dimensional habitat, these founder events are the spatial analog of genetic drift in a randomly mating population. The spatial series of allele frequencies created by successive founder events is equivalent to the time series of allele frequencies in a population of effective size ke, the effective number of founders. We derive an expression for ke in a discrete-population model that allows for local population growth and migration among established populations. If there is selection, the net effect is determined approximately by the product of the selection coefficients and the number of generations between successive founding events. We use the model of a single population to compute analytically several quantities for an allele present in the source population: (i) the probability that it survives the series of colonization events, (ii) the probability that it reaches a specified threshold frequency in the last population, and (iii) the mean and variance of the frequencies in each population. We show that the analytic theory provides a good approximation to simulation results. A consequence of our approximation is that the average heterozygosity of neutral alleles decreases by a factor of 1-1/(2ke) in each new population. Therefore, the population genetic consequences of surfing can be predicted approximately by the effective number of founders and the effective selection coefficients, even in the presence of migration among populations. We also show that our analytic results are applicable to a model of range expansion in a continuously distributed population.

Mesh:

Year:  2012        PMID: 22367031      PMCID: PMC3338258          DOI: 10.1534/genetics.112.139022

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  25 in total

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5.  Deleterious mutations can surf to high densities on the wave front of an expanding population.

Authors:  Justin M J Travis; Tamara Münkemüller; Olivia J Burton; Alex Best; Calvin Dytham; Karin Johst
Journal:  Mol Biol Evol       Date:  2007-08-16       Impact factor: 16.240

6.  The global pattern of gene identity variation reveals a history of long-range migrations, bottlenecks, and local mate exchange: implications for biological race.

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7.  Surfing during population expansions promotes genetic revolutions and structuration.

Authors:  Laurent Excoffier; Nicolas Ray
Journal:  Trends Ecol Evol       Date:  2008-05-24       Impact factor: 17.712

8.  The fate of mutations surfing on the wave of a range expansion.

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Journal:  Mol Biol Evol       Date:  2005-11-09       Impact factor: 16.240

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Review 10.  Spatial patterns of variation due to natural selection in humans.

Authors:  John Novembre; Anna Di Rienzo
Journal:  Nat Rev Genet       Date:  2009-10-13       Impact factor: 53.242

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  53 in total

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Journal:  Genetics       Date:  2013-06-07       Impact factor: 4.562

2.  Analysis and rejection sampling of Wright-Fisher diffusion bridges.

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Authors:  Arndt Hampe; Marie-Hélène Pemonge; Rémy J Petit
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4.  Range instability leads to cytonuclear discordance in a morphologically cryptic ground squirrel species complex.

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6.  Genetic variation during range expansion: effects of habitat novelty and hybridization.

Authors:  Amanda A Pierce; Rafael Gutierrez; Amber M Rice; Karin S Pfennig
Journal:  Proc Biol Sci       Date:  2017-04-12       Impact factor: 5.349

7.  Surfing in tortoises? Empirical signs of genetic structuring owing to range expansion.

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8.  Stochastic processes drive rapid genomic divergence during experimental range expansions.

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Review 9.  Hybridization as a facilitator of species range expansion.

Authors:  Karin S Pfennig; Audrey L Kelly; Amanda A Pierce
Journal:  Proc Biol Sci       Date:  2016-09-28       Impact factor: 5.349

10.  Admixture on the northern front: population genomics of range expansion in the white-footed mouse (Peromyscus leucopus) and secondary contact with the deer mouse (Peromyscus maniculatus).

Authors:  A Garcia-Elfring; R D H Barrett; M Combs; T J Davies; J Munshi-South; V Millien
Journal:  Heredity (Edinb)       Date:  2017-09-13       Impact factor: 3.821

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