Literature DB >> 30940062

Stochastic processes drive rapid genomic divergence during experimental range expansions.

Christopher Weiss-Lehman1, Silas Tittes1, Nolan C Kane1, Ruth A Hufbauer2,3, Brett A Melbourne1.   

Abstract

Range expansions are crucibles for rapid evolution, acting via both selective and neutral mechanisms. While selection on traits such as dispersal and fecundity may increase expansion speed, neutral mechanisms arising from repeated bottlenecks and genetic drift in edge populations (i.e. gene surfing) could slow spread or make it less predictable. Thus, it is necessary to disentangle the effects of selection from neutral mechanisms to robustly predict expansion dynamics. This is difficult to do with expansions in nature, as replicated expansions are required to distinguish selective and neutral processes in the genome. Using replicated microcosms of the red flour beetle ( Tribolium castaneum), we identify a robust signature of stochastic, neutral mechanisms in genomic changes arising over only eight generations of expansion and assess the role of standing variation and de novo mutations in driving these changes. Average genetic diversity was reduced within edge populations, but with substantial among-replicate variability in the changes at specific genomic windows. Such variability in genomic changes is consistent with a large role for stochastic, neutral processes. This increased genomic divergence among populations was mirrored by heightened variation in population size and expansion speed, suggesting that stochastic variation in the genome could increase unpredictability of range expansions.

Entities:  

Keywords:  gene surfing; genetic drift; pool-seq; range expansion; rapid evolution

Mesh:

Year:  2019        PMID: 30940062      PMCID: PMC6501681          DOI: 10.1098/rspb.2019.0231

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  38 in total

1.  Mutations arising in the wave front of an expanding population.

Authors:  Christopher A Edmonds; Anita S Lillie; L Luca Cavalli-Sforza
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-19       Impact factor: 11.205

2.  Life-history evolution in range-shifting populations.

Authors:  Benjamin L Phillips; Gregory P Brown; Richard Shine
Journal:  Ecology       Date:  2010-06       Impact factor: 5.499

3.  Evolution of dispersal and life history interact to drive accelerating spread of an invasive species.

Authors:  T Alex Perkins; Benjamin L Phillips; Marissa L Baskett; Alan Hastings
Journal:  Ecol Lett       Date:  2013-07-01       Impact factor: 9.492

4.  Random dispersal in theoretical populations.

Authors:  J G SKELLAM
Journal:  Biometrika       Date:  1951-06       Impact factor: 2.445

5.  Local Adaptation Interacts with Expansion Load during Range Expansion: Maladaptation Reduces Expansion Load.

Authors:  Kimberly J Gilbert; Nathaniel P Sharp; Amy L Angert; Gina L Conte; Jeremy A Draghi; Frédéric Guillaume; Anna L Hargreaves; Remi Matthey-Doret; Michael C Whitlock
Journal:  Am Nat       Date:  2017-01-27       Impact factor: 3.926

6.  Successive range expansion promotes diversity and accelerates evolution in spatially structured microbial populations.

Authors:  Felix Goldschmidt; Roland R Regoes; David R Johnson
Journal:  ISME J       Date:  2017-05-23       Impact factor: 10.302

7.  Rapid evolution accelerates plant population spread in fragmented experimental landscapes.

Authors:  Jennifer L Williams; Bruce E Kendall; Jonathan M Levine
Journal:  Science       Date:  2016-07-29       Impact factor: 47.728

8.  Distance from sub-Saharan Africa predicts mutational load in diverse human genomes.

Authors:  Brenna M Henn; Laura R Botigué; Stephan Peischl; Isabelle Dupanloup; Mikhail Lipatov; Brian K Maples; Alicia R Martin; Shaila Musharoff; Howard Cann; Michael P Snyder; Laurent Excoffier; Jeffrey M Kidd; Carlos D Bustamante
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-28       Impact factor: 11.205

9.  Eco-evolutionary feedbacks during experimental range expansions.

Authors:  Emanuel A Fronhofer; Florian Altermatt
Journal:  Nat Commun       Date:  2015-04-22       Impact factor: 14.919

10.  Fast and accurate short read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2009-05-18       Impact factor: 6.937

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