Literature DB >> 2236034

Beta-globin locus activation regions: conservation of organization, structure, and function.

Q L Li1, B Zhou, P Powers, T Enver, G Stamatoyannopoulos.   

Abstract

The human beta-globin locus activation region (LAR) comprises four erythroid-specific DNase I hypersensitive sites (I-IV) thought to be largely responsible for activating the beta-globin domain and facilitating high-level erythroid-specific globin gene expression. We identified the goat beta-globin LAR, determined 10.2 kilobases of its sequence, and demonstrated its function in transgenic mice. The human and goat LARs share 6.5 kilobases of homologous sequences that are as highly conserved as the epsilon-globin gene promoters. Furthermore, the overall spatial organization of the two LARs has been conserved. These results suggest that the functionally relevant regions of the LAR are large and that in addition to their primary structure, the spatial relationship of the conserved elements is important for LAR function.

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Year:  1990        PMID: 2236034      PMCID: PMC54924          DOI: 10.1073/pnas.87.21.8207

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

1.  A versatile and simplified non-random strategy for nucleotide sequencing.

Authors:  Q L Li; G D Wu
Journal:  Gene       Date:  1987       Impact factor: 3.688

2.  High-level erythroid expression of human alpha-globin genes in transgenic mice.

Authors:  T M Ryan; R R Behringer; T M Townes; R D Palmiter; R L Brinster
Journal:  Proc Natl Acad Sci U S A       Date:  1989-01       Impact factor: 11.205

3.  A developmentally stable chromatin structure in the human beta-globin gene cluster.

Authors:  W C Forrester; C Thompson; J T Elder; M Groudine
Journal:  Proc Natl Acad Sci U S A       Date:  1986-03       Impact factor: 11.205

4.  The "beta-like-globin" gene domain in human erythroid cells.

Authors:  D Tuan; W Solomon; Q Li; I M London
Journal:  Proc Natl Acad Sci U S A       Date:  1985-10       Impact factor: 11.205

5.  High-level, erythroid-specific expression of the human alpha-globin gene in transgenic mice and the production of human hemoglobin in murine erythrocytes.

Authors:  O Hanscombe; M Vidal; J Kaeda; L Luzzatto; D R Greaves; F Grosveld
Journal:  Genes Dev       Date:  1989-10       Impact factor: 11.361

6.  Nucleotide sequence of 16-kilobase pairs of DNA 5' to the human epsilon-globin gene.

Authors:  Q Li; P A Powers; O Smithies
Journal:  J Biol Chem       Date:  1985-12-05       Impact factor: 5.157

7.  Developmental regulation of a cloned adult beta-globin gene in transgenic mice.

Authors:  J Magram; K Chada; F Costantini
Journal:  Nature       Date:  1985 May 23-29       Impact factor: 49.962

8.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

9.  Regulated expression of human A gamma-, beta-, and hybrid gamma beta-globin genes in transgenic mice: manipulation of the developmental expression patterns.

Authors:  G Kollias; N Wrighton; J Hurst; F Grosveld
Journal:  Cell       Date:  1986-07-04       Impact factor: 41.582

10.  Position-independent, high-level expression of the human beta-globin gene in transgenic mice.

Authors:  F Grosveld; G B van Assendelft; D R Greaves; G Kollias
Journal:  Cell       Date:  1987-12-24       Impact factor: 41.582

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  26 in total

Review 1.  Locus control regions.

Authors:  Qiliang Li; Kenneth R Peterson; Xiangdong Fang; George Stamatoyannopoulos
Journal:  Blood       Date:  2002-11-01       Impact factor: 22.113

2.  Sequences within and flanking hypersensitive sites 3 and 2 of the beta-globin locus control region required for synergistic versus additive interaction with the epsilon-globin gene promoter.

Authors:  J D Jackson; W Miller; R C Hardison
Journal:  Nucleic Acids Res       Date:  1996-11-01       Impact factor: 16.971

3.  In vivo protein-DNA interactions at hypersensitive site 3 of the human beta-globin locus control region.

Authors:  E C Strauss; S H Orkin
Journal:  Proc Natl Acad Sci U S A       Date:  1992-07-01       Impact factor: 11.205

4.  Synergistic and additive properties of the beta-globin locus control region (LCR) revealed by 5'HS3 deletion mutations: implication for LCR chromatin architecture.

Authors:  Xiangdong Fang; Jin Sun; Ping Xiang; Man Yu; Patrick A Navas; Kenneth R Peterson; George Stamatoyannopoulos; Qiliang Li
Journal:  Mol Cell Biol       Date:  2005-08       Impact factor: 4.272

5.  Characterization of a DNA binding activity in DNAse I hypersensitive site 4 of the human globin locus control region.

Authors:  M Walters; C Kim; R Gelinas
Journal:  Nucleic Acids Res       Date:  1991-10-11       Impact factor: 16.971

6.  Protein-DNA interactions in vivo of an erythroid-specific, human beta-globin locus enhancer.

Authors:  P M Reddy; C K Shen
Journal:  Proc Natl Acad Sci U S A       Date:  1991-10-01       Impact factor: 11.205

7.  Transcriptional enhancement by GATA1-occupied DNA segments is strongly associated with evolutionary constraint on the binding site motif.

Authors:  Yong Cheng; David C King; Louis C Dore; Xinmin Zhang; Yuepin Zhou; Ying Zhang; Christine Dorman; Demesew Abebe; Swathi A Kumar; Francesca Chiaromonte; Webb Miller; Roland D Green; Mitchell J Weiss; Ross C Hardison
Journal:  Genome Res       Date:  2008-09-25       Impact factor: 9.043

8.  Effect of deletion of 5'HS3 or 5'HS2 of the human beta-globin locus control region on the developmental regulation of globin gene expression in beta-globin locus yeast artificial chromosome transgenic mice.

Authors:  K R Peterson; C H Clegg; P A Navas; E J Norton; T G Kimbrough; G Stamatoyannopoulos
Journal:  Proc Natl Acad Sci U S A       Date:  1996-06-25       Impact factor: 11.205

9.  Multiple regions of p45 NF-E2 are required for beta-globin gene expression in erythroid cells.

Authors:  T L Bean; P A Ney
Journal:  Nucleic Acids Res       Date:  1997-06-15       Impact factor: 16.971

10.  Analysis of mice containing a targeted deletion of beta-globin locus control region 5' hypersensitive site 3.

Authors:  B A Hug; R L Wesselschmidt; S Fiering; M A Bender; E Epner; M Groudine; T J Ley
Journal:  Mol Cell Biol       Date:  1996-06       Impact factor: 4.272

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