Literature DB >> 22357600

The splicing regulator Rbfox2 is required for both cerebellar development and mature motor function.

Lauren T Gehman1, Pratap Meera, Peter Stoilov, Lily Shiue, Janelle E O'Brien, Miriam H Meisler, Manuel Ares, Thomas S Otis, Douglas L Black.   

Abstract

The Rbfox proteins (Rbfox1, Rbfox2, and Rbfox3) regulate the alternative splicing of many important neuronal transcripts and have been implicated in a variety of neurological disorders. However, their roles in brain development and function are not well understood, in part due to redundancy in their activities. Here we show that, unlike Rbfox1 deletion, the CNS-specific deletion of Rbfox2 disrupts cerebellar development. Genome-wide analysis of Rbfox2(-/-) brain RNA identifies numerous splicing changes altering proteins important both for brain development and mature neuronal function. To separate developmental defects from alterations in the physiology of mature cells, Rbfox1 and Rbfox2 were deleted from mature Purkinje cells, resulting in highly irregular firing. Notably, the Scn8a mRNA encoding the Na(v)1.6 sodium channel, a key mediator of Purkinje cell pacemaking, is improperly spliced in RbFox2 and Rbfox1 mutant brains, leading to highly reduced protein expression. Thus, Rbfox2 protein controls a post-transcriptional program required for proper brain development. Rbfox2 is subsequently required with Rbfox1 to maintain mature neuronal physiology, specifically Purkinje cell pacemaking, through their shared control of sodium channel transcript splicing.

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Year:  2012        PMID: 22357600      PMCID: PMC3305983          DOI: 10.1101/gad.182477.111

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  74 in total

1.  Open-channel block by the cytoplasmic tail of sodium channel beta4 as a mechanism for resurgent sodium current.

Authors:  Tina M Grieco; Jyoti D Malhotra; Chunling Chen; Lori L Isom; Indira M Raman
Journal:  Neuron       Date:  2005-01-20       Impact factor: 17.173

2.  Molecular basis of RNA recognition by the human alternative splicing factor Fox-1.

Authors:  Sigrid D Auweter; Rudi Fasan; Luc Reymond; Jason G Underwood; Douglas L Black; Stefan Pitsch; Frédéric H-T Allain
Journal:  EMBO J       Date:  2005-12-15       Impact factor: 11.598

Review 3.  Neuronal proteins custom designed by alternative splicing.

Authors:  Diane Lipscombe
Journal:  Curr Opin Neurobiol       Date:  2005-06       Impact factor: 6.627

4.  Developmental control of CaV1.2 L-type calcium channel splicing by Fox proteins.

Authors:  Zhen Zhi Tang; Sika Zheng; Julia Nikolic; Douglas L Black
Journal:  Mol Cell Biol       Date:  2009-06-29       Impact factor: 4.272

5.  Nova-1 regulates neuron-specific alternative splicing and is essential for neuronal viability.

Authors:  K B Jensen; B K Dredge; G Stefani; R Zhong; R J Buckanovich; H J Okano; Y Y Yang; R B Darnell
Journal:  Neuron       Date:  2000-02       Impact factor: 17.173

6.  CHD5, a new member of the chromodomain gene family, is preferentially expressed in the nervous system.

Authors:  Patricia M Thompson; Takahiro Gotoh; Marleen Kok; Peter S White; Garrett M Brodeur
Journal:  Oncogene       Date:  2003-02-20       Impact factor: 9.867

7.  Identification of neuronal nuclei (NeuN) as Fox-3, a new member of the Fox-1 gene family of splicing factors.

Authors:  Kee K Kim; Robert S Adelstein; Sachiyo Kawamoto
Journal:  J Biol Chem       Date:  2009-08-27       Impact factor: 5.157

8.  Defining the regulatory network of the tissue-specific splicing factors Fox-1 and Fox-2.

Authors:  Chaolin Zhang; Zuo Zhang; John Castle; Shuying Sun; Jason Johnson; Adrian R Krainer; Michael Q Zhang
Journal:  Genes Dev       Date:  2008-09-15       Impact factor: 11.361

9.  A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain.

Authors:  Adrienne E McKee; Emmanuel Minet; Charlene Stern; Shervin Riahi; Charles D Stiles; Pamela A Silver
Journal:  BMC Dev Biol       Date:  2005-07-20       Impact factor: 1.978

Review 10.  Fox-1 family of RNA-binding proteins.

Authors:  Hidehito Kuroyanagi
Journal:  Cell Mol Life Sci       Date:  2009-12       Impact factor: 9.261

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  106 in total

Review 1.  Emerging mechanisms and consequences of calcium regulation of alternative splicing in neurons and endocrine cells.

Authors:  Aleh Razanau; Jiuyong Xie
Journal:  Cell Mol Life Sci       Date:  2013-06-26       Impact factor: 9.261

2.  Rbfox Proteins Regulate Splicing as Part of a Large Multiprotein Complex LASR.

Authors:  Andrey Damianov; Yi Ying; Chia-Ho Lin; Ji-Ann Lee; Diana Tran; Ajay A Vashisht; Emad Bahrami-Samani; Yi Xing; Kelsey C Martin; James A Wohlschlegel; Douglas L Black
Journal:  Cell       Date:  2016-04-21       Impact factor: 41.582

3.  Dose-dependent action of the RNA binding protein FOX-1 to relay X-chromosome number and determine C. elegans sex.

Authors:  Behnom Farboud; Catherine S Novak; Monique Nicoll; Alyssa Quiogue; Barbara J Meyer
Journal:  Elife       Date:  2020-12-29       Impact factor: 8.140

Review 4.  Alternative splicing programming of axon formation.

Authors:  Sika Zheng
Journal:  Wiley Interdiscip Rev RNA       Date:  2020-01-10       Impact factor: 9.957

5.  Neuron-enriched RNA-binding Proteins Regulate Pancreatic Beta Cell Function and Survival.

Authors:  Jonàs Juan-Mateu; Tatiana H Rech; Olatz Villate; Esther Lizarraga-Mollinedo; Anna Wendt; Jean-Valery Turatsinze; Letícia A Brondani; Tarlliza R Nardelli; Tatiane C Nogueira; Jonathan L S Esguerra; Maria Inês Alvelos; Piero Marchetti; Lena Eliasson; Décio L Eizirik
Journal:  J Biol Chem       Date:  2017-01-11       Impact factor: 5.157

6.  Rbfox Splicing Factors Promote Neuronal Maturation and Axon Initial Segment Assembly.

Authors:  Martin Jacko; Sebastien M Weyn-Vanhentenryck; John W Smerdon; Rui Yan; Huijuan Feng; Damian J Williams; Joy Pai; Ke Xu; Hynek Wichterle; Chaolin Zhang
Journal:  Neuron       Date:  2018-02-01       Impact factor: 17.173

7.  Rbfox proteins regulate alternative mRNA splicing through evolutionarily conserved RNA bridges.

Authors:  Michael T Lovci; Dana Ghanem; Henry Marr; Justin Arnold; Sherry Gee; Marilyn Parra; Tiffany Y Liang; Thomas J Stark; Lauren T Gehman; Shawn Hoon; Katlin B Massirer; Gabriel A Pratt; Douglas L Black; Joe W Gray; John G Conboy; Gene W Yeo
Journal:  Nat Struct Mol Biol       Date:  2013-11-10       Impact factor: 15.369

8.  Repression of Pumilio Protein Expression by Rbfox1 Promotes Germ Cell Differentiation.

Authors:  Arnaldo Carreira-Rosario; Varsha Bhargava; Jens Hillebrand; Rahul K Kollipara; Mani Ramaswami; Michael Buszczak
Journal:  Dev Cell       Date:  2016-03-07       Impact factor: 12.270

Review 9.  Cellular and circuit mechanisms underlying spinocerebellar ataxias.

Authors:  Pratap Meera; Stefan M Pulst; Thomas S Otis
Journal:  J Physiol       Date:  2016-06-12       Impact factor: 5.182

10.  Cell-Type-Specific Alternative Splicing Governs Cell Fate in the Developing Cerebral Cortex.

Authors:  Xiaochang Zhang; Ming Hui Chen; Xuebing Wu; Andrew Kodani; Jean Fan; Ryan Doan; Manabu Ozawa; Jacqueline Ma; Nobuaki Yoshida; Jeremy F Reiter; Douglas L Black; Peter V Kharchenko; Phillip A Sharp; Christopher A Walsh
Journal:  Cell       Date:  2016-08-25       Impact factor: 41.582

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