Literature DB >> 31922356

Alternative splicing programming of axon formation.

Sika Zheng1.   

Abstract

Alternative pre-mRNA splicing generates multiple mRNA isoforms of different structures and functions from a single gene. While the prevalence of alternative splicing control is widely recognized, and the underlying regulatory mechanisms have long been studied, the physiological relevance and biological necessity for alternative splicing are only slowly being revealed. Significant inroads have been made in the brain, where alternative splicing regulation is particularly pervasive and conserved. Various aspects of brain development and function (from neurogenesis, neuronal migration, synaptogenesis, to the homeostasis of neuronal activity) involve alternative splicing regulation. Recent studies have begun to interrogate the possible role of alternative splicing in axon formation, a neuron-exclusive morphological and functional characteristic. We discuss how alternative splicing plays an instructive role in each step of axon formation. Converging genetic, molecular, and cellular evidence from studies of multiple alternative splicing regulators in different systems shows that a biological process as complicated and unique as axon formation requires highly coordinated and specific alternative splicing events. This article is categorized under: RNA Processing > Splicing Regulation/Alternative Splicing RNA in Disease and Development > RNA in Development.
© 2020 Wiley Periodicals, Inc.

Entities:  

Keywords:  Axon guidance; CELF; NOVA; PTBP; RBFOX

Mesh:

Substances:

Year:  2020        PMID: 31922356      PMCID: PMC7594648          DOI: 10.1002/wrna.1585

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev RNA        ISSN: 1757-7004            Impact factor:   9.957


  92 in total

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Authors:  Qun Pan; Ofer Shai; Leo J Lee; Brendan J Frey; Benjamin J Blencowe
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Review 2.  Alternative Splicing in the Mammalian Nervous System: Recent Insights into Mechanisms and Functional Roles.

Authors:  Bushra Raj; Benjamin J Blencowe
Journal:  Neuron       Date:  2015-07-01       Impact factor: 17.173

Review 3.  Alternative splicing and nonsense-mediated mRNA decay enforce neural specific gene expression.

Authors:  Sika Zheng
Journal:  Int J Dev Neurosci       Date:  2016-03-08       Impact factor: 2.457

4.  Drosophila Dscam is an axon guidance receptor exhibiting extraordinary molecular diversity.

Authors:  D Schmucker; J C Clemens; H Shu; C A Worby; J Xiao; M Muda; J E Dixon; S L Zipursky
Journal:  Cell       Date:  2000-06-09       Impact factor: 41.582

5.  Rescuing Z+ agrin splicing in Nova null mice restores synapse formation and unmasks a physiologic defect in motor neuron firing.

Authors:  Matteo Ruggiu; Ruth Herbst; Natalie Kim; Marko Jevsek; John J Fak; Mary Anne Mann; Gerald Fischbach; Steven J Burden; Robert B Darnell
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-12       Impact factor: 11.205

6.  The splicing regulator Rbfox2 is required for both cerebellar development and mature motor function.

Authors:  Lauren T Gehman; Pratap Meera; Peter Stoilov; Lily Shiue; Janelle E O'Brien; Miriam H Meisler; Manuel Ares; Thomas S Otis; Douglas L Black
Journal:  Genes Dev       Date:  2012-02-22       Impact factor: 11.361

7.  Temporal regulation of axonal repulsion by alternative splicing of a conserved microexon in mammalian Robo1 and Robo2.

Authors:  Verity Johnson; Harald J Junge; Zhe Chen
Journal:  Elife       Date:  2019-08-08       Impact factor: 8.140

Review 8.  The semaphorins.

Authors:  Umar Yazdani; Jonathan R Terman
Journal:  Genome Biol       Date:  2006-03-30       Impact factor: 13.583

9.  NOVA regulates Dcc alternative splicing during neuronal migration and axon guidance in the spinal cord.

Authors:  Janelle C Leggere; Yuhki Saito; Robert B Darnell; Marc Tessier-Lavigne; Harald J Junge; Zhe Chen
Journal:  Elife       Date:  2016-05-25       Impact factor: 8.140

Review 10.  Advances and challenges in the detection of transcriptome-wide protein-RNA interactions.

Authors:  Emily C Wheeler; Eric L Van Nostrand; Gene W Yeo
Journal:  Wiley Interdiscip Rev RNA       Date:  2017-08-29       Impact factor: 9.957

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  6 in total

1.  Developmental Attenuation of Neuronal Apoptosis by Neural-Specific Splicing of Bak1 Microexon.

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Journal:  Neuron       Date:  2020-07-24       Impact factor: 17.173

2.  LncRNA Pnky Positively Regulates Neural Stem Cell Migration by Modulating mRNA Splicing and Export of Target Genes.

Authors:  Jiannan Du; Yuan Li; Yuting Su; Wenqian Zhi; Jiale Zhang; Cheng Zhang; Juan Wang; Wensheng Deng; Shasha Zhao
Journal:  Cell Mol Neurobiol       Date:  2022-06-24       Impact factor: 5.046

3.  Putative Coiled-Coil Domain-Dependent Autoinhibition and Alternative Splicing Determine SHTN1's Actin-Binding Activity.

Authors:  Volkan Ergin; Sika Zheng
Journal:  J Mol Biol       Date:  2020-05-01       Impact factor: 5.469

4.  Using antisense oligonucleotides for the physiological modulation of the alternative splicing of NF1 exon 23a during PC12 neuronal differentiation.

Authors:  Josep Biayna; Helena Mazuelas; Bernat Gel; Ernest Terribas; Gabrijela Dumbovic; Inma Rosas; Juana Fernández-Rodriguez; Ignacio Blanco; Elisabeth Castellanos; Meritxell Carrió; Conxi Lazaro; Eduard Serra
Journal:  Sci Rep       Date:  2021-02-11       Impact factor: 4.379

5.  Multilayered regulations of alternative splicing, NMD, and protein stability control temporal induction and tissue-specific expression of TRIM46 during axon formation.

Authors:  John K Vuong; Volkan Ergin; Liang Chen; Sika Zheng
Journal:  Nat Commun       Date:  2022-04-19       Impact factor: 17.694

6.  Cell-specific regulation of gene expression using splicing-dependent frameshifting.

Authors:  Jonathan P Ling; Alexei M Bygrave; Clayton P Santiago; Rogger P Carmen-Orozco; Vickie T Trinh; Minzhong Yu; Yini Li; Ying Liu; Kyra D Bowden; Leighton H Duncan; Jeong Han; Kamil Taneja; Rochinelle Dongmo; Travis A Babola; Patrick Parker; Lizhi Jiang; Patrick J Leavey; Jennifer J Smith; Rachel Vistein; Megan Y Gimmen; Benjamin Dubner; Eric Helmenstine; Patric Teodorescu; Theodoros Karantanos; Gabriel Ghiaur; Patrick O Kanold; Dwight Bergles; Ben Langmead; Shuying Sun; Kristina J Nielsen; Neal Peachey; Mandeep S Singh; W Brian Dalton; Fatemeh Rajaii; Richard L Huganir; Seth Blackshaw
Journal:  Nat Commun       Date:  2022-10-01       Impact factor: 17.694

  6 in total

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