Literature DB >> 22350768

A new strategy for construction of artificial miRNA vectors in Arabidopsis.

Gang Liang1, Hua He, Yang Li, Diqiu Yu.   

Abstract

MicroRNAs are a class of small RNAs that specifically suppress their target genes by transcript cleavage or/and translation repression. Natural miRNA precursors have been used for the backbones of artificial miRNA precursors, which can give rise to expected artificial miRNAs with which to repress specific target genes. Artificial miRNA technology is a powerful tool to silence genes of interest. However, it is costly and time-consuming to construct artificial miRNA precursors by the use of an overlapping PCR method. We describe a new strategy to construct artificial miRNAs. A miRNA gene consists of three components (upstream, stem-loop, and downstream regions). Upstream and downstream regions of a natural miRNA transcript were amplified in conjunction with the introduction of two suitable restriction sites in the amplicons, which were inserted into a plasmid to form a median vector. Production of an artificial miRNA vector was easily achieved by insertion of an artificial stem-loop into the median vector. The artificial miRNAs produced by this method efficiently repressed their target genes in Arabidopsis. In addition, two artificial miRNA constructs were expressed as one polycistron driven by the CaMV 35S promoter and their targets were suppressed simultaneously in Arabidopsis. Thus, artificial miRNAs are a powerful tool with which to analyze rapidly the functions of not only a single gene or multiple homologous genes, but also multiple non-homologous genes.

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Year:  2012        PMID: 22350768     DOI: 10.1007/s00425-012-1610-5

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  20 in total

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Authors:  Yoontae Lee; Kipyoung Jeon; Jun-Tae Lee; Sunyoung Kim; V Narry Kim
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Authors:  S Schellmann; A Schnittger; V Kirik; T Wada; K Okada; A Beermann; J Thumfahrt; G Jürgens; M Hülskamp
Journal:  EMBO J       Date:  2002-10-01       Impact factor: 11.598

3.  Highly specific gene silencing by artificial microRNAs in the unicellular alga Chlamydomonas reinhardtii.

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Journal:  Plant J       Date:  2009-01-19       Impact factor: 6.417

Review 4.  Origin, biogenesis, and activity of plant microRNAs.

Authors:  Olivier Voinnet
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

5.  MicroRNA395 mediates regulation of sulfate accumulation and allocation in Arabidopsis thaliana.

Authors:  Gang Liang; Fengxi Yang; Diqiu Yu
Journal:  Plant J       Date:  2010-03-31       Impact factor: 6.417

6.  Molecular evolution of a microRNA cluster.

Authors:  Andrea Tanzer; Peter F Stadler
Journal:  J Mol Biol       Date:  2004-05-28       Impact factor: 5.469

7.  A genetic and physiological analysis of late flowering mutants in Arabidopsis thaliana.

Authors:  M Koornneef; C J Hanhart; J H van der Veen
Journal:  Mol Gen Genet       Date:  1991-09

8.  Functional links between clustered microRNAs: suppression of cell-cycle inhibitors by microRNA clusters in gastric cancer.

Authors:  Young-Kook Kim; Jieun Yu; Tae Su Han; Seong-Yeon Park; Bumjin Namkoong; Dong Hyuk Kim; Keun Hur; Moon-Won Yoo; Hyuk-Joon Lee; Han-Kwang Yang; V Narry Kim
Journal:  Nucleic Acids Res       Date:  2009-01-19       Impact factor: 16.971

9.  Plant polycistronic precursors containing non-homologous microRNAs target transcripts encoding functionally related proteins.

Authors:  Francisco Merchan; Adnane Boualem; Martin Crespi; Florian Frugier
Journal:  Genome Biol       Date:  2009-12-01       Impact factor: 13.583

10.  Highly specific gene silencing by artificial miRNAs in rice.

Authors:  Norman Warthmann; Hao Chen; Stephan Ossowski; Detlef Weigel; Philippe Hervé
Journal:  PLoS One       Date:  2008-03-19       Impact factor: 3.240

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  19 in total

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Journal:  Planta       Date:  2013-06-26       Impact factor: 4.116

2.  Two bHLH Transcription Factors, bHLH34 and bHLH104, Regulate Iron Homeostasis in Arabidopsis thaliana.

Authors:  Xiaoli Li; Huimin Zhang; Qin Ai; Gang Liang; Diqiu Yu
Journal:  Plant Physiol       Date:  2016-02-26       Impact factor: 8.340

Review 3.  Artificial microRNA mediated gene silencing in plants: progress and perspectives.

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Journal:  Plant Mol Biol       Date:  2014-07-15       Impact factor: 4.076

4.  Identification of miRNAs and miRNA-mediated regulatory pathways in Carica papaya.

Authors:  Gang Liang; Yang Li; Hua He; Fang Wang; Diqiu Yu
Journal:  Planta       Date:  2013-07-13       Impact factor: 4.116

5.  MicroRNA candidate miRcand137 in apple is induced by Botryosphaeria dothidea for impairing host defense.

Authors:  Xinyi Yu; Yingjun Hou; Lifang Cao; Tingting Zhou; Sanhong Wang; Kaixu Hu; Jingrui Chen; Shenchun Qu
Journal:  Plant Physiol       Date:  2022-06-27       Impact factor: 8.005

6.  Engineering Artificial MicroRNAs for Multiplex Gene Silencing and Simplified Transgenic Screen.

Authors:  Nannan Zhang; Dandan Zhang; Samuel L Chen; Ben-Qiang Gong; Yanjun Guo; Lahong Xu; Xiao-Ning Zhang; Jian-Feng Li
Journal:  Plant Physiol       Date:  2018-10-05       Impact factor: 8.340

7.  New generation of artificial MicroRNA and synthetic trans-acting small interfering RNA vectors for efficient gene silencing in Arabidopsis.

Authors:  Alberto Carbonell; Atsushi Takeda; Noah Fahlgren; Simon C Johnson; Josh T Cuperus; James C Carrington
Journal:  Plant Physiol       Date:  2014-03-19       Impact factor: 8.340

8.  Photoperiod-responsive changes in chromatin accessibility in phloem companion and epidermis cells of Arabidopsis leaves.

Authors:  Hao Tian; Yuru Li; Ce Wang; Xingwen Xu; Yajie Zhang; Qudsia Zeb; Johan Zicola; Yongfu Fu; Franziska Turck; Legong Li; Zefu Lu; Liangyu Liu
Journal:  Plant Cell       Date:  2021-05-05       Impact factor: 11.277

9.  Recent Advances in Plant Gene Silencing Methods.

Authors:  Prachi Pandey; Kirankumar S Mysore; Muthappa Senthil-Kumar
Journal:  Methods Mol Biol       Date:  2022

10.  A series of TA-based and zero-background vectors for plant functional genomics.

Authors:  Chuntao Wang; Xianlun Yin; Xiangxiang Kong; Wansha Li; Lan Ma; Xudong Sun; Yanlong Guan; Christopher D Todd; Yongping Yang; Xiangyang Hu
Journal:  PLoS One       Date:  2013-03-29       Impact factor: 3.240

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