Literature DB >> 35325413

Recent Advances in Plant Gene Silencing Methods.

Prachi Pandey1, Kirankumar S Mysore2, Muthappa Senthil-Kumar3.   

Abstract

With the increasing understanding of fundamentals of gene silencing pathways in plants, various tools and techniques for downregulating the expression of a target gene have been developed across multiple plant species. This chapter provides an insight into the molecular mechanisms of gene silencing and highlights the advancements in various gene silencing approaches. The prominent aspects of different gene silencing methods, their advantages and disadvantages have been discussed. A succinct discussion on the newly emerged microRNA-based technologies like microRNA-induced gene silencing (MIGS) and microRNA-mediated virus-induced gene silencing (MIR-VIGS) are also presented. We have also discussed the gene-editing system like CRISPR-Cas. The prominent bottlenecks in gene silencing methods are the off-target effects and lack of universal applicability. However, the tremendous growth in understanding of this field reflects the potentials for improvements in the currently available approaches and the development of new widely applicable methods for easy, fast, and efficient functional characterization of plant genes.
© 2022. Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Gene editing; Gene silencing methods; Posttranscriptional gene silencing; Transcriptional gene silencing

Mesh:

Year:  2022        PMID: 35325413     DOI: 10.1007/978-1-0716-1875-2_1

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  108 in total

1.  Transcriptional and posttranscriptional gene silencing are mechanistically related.

Authors:  T Sijen; I Vijn; A Rebocho; R van Blokland; D Roelofs; J N Mol; J M Kooter
Journal:  Curr Biol       Date:  2001-03-20       Impact factor: 10.834

Review 2.  Gene silencing as an adaptive defence against viruses.

Authors:  P M Waterhouse; M B Wang; T Lough
Journal:  Nature       Date:  2001-06-14       Impact factor: 49.962

Review 3.  Repeat-induced gene silencing in fungi.

Authors:  Eric U Selker
Journal:  Adv Genet       Date:  2002       Impact factor: 1.944

4.  RNA silencing genes control de novo DNA methylation.

Authors:  Simon W-L Chan; Daniel Zilberman; Zhixin Xie; Lisa K Johansen; James C Carrington; Steven E Jacobsen
Journal:  Science       Date:  2004-02-27       Impact factor: 47.728

Review 5.  Transcriptional gene silencing in plants: targets, inducers and regulators.

Authors:  H Vaucheret; M Fagard
Journal:  Trends Genet       Date:  2001-01       Impact factor: 11.639

6.  Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors:  A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

Review 7.  Epigenetic phenomena in filamentous fungi: useful paradigms or repeat-induced confusion?

Authors:  E U Selker
Journal:  Trends Genet       Date:  1997-08       Impact factor: 11.639

Review 8.  TALENs: a widely applicable technology for targeted genome editing.

Authors:  J Keith Joung; Jeffry D Sander
Journal:  Nat Rev Mol Cell Biol       Date:  2012-11-21       Impact factor: 94.444

9.  Methylation induced premeiotically in Ascobolus: coextension with DNA repeat lengths and effect on transcript elongation.

Authors:  C Barry; G Faugeron; J L Rossignol
Journal:  Proc Natl Acad Sci U S A       Date:  1993-05-15       Impact factor: 11.205

10.  A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.

Authors:  Martin Jinek; Krzysztof Chylinski; Ines Fonfara; Michael Hauer; Jennifer A Doudna; Emmanuelle Charpentier
Journal:  Science       Date:  2012-06-28       Impact factor: 47.728

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