Literature DB >> 22348277

A Bayesian approach to improved estimation of causal effect predictiveness for a principal surrogate endpoint.

Corwin M Zigler1, Thomas R Belin.   

Abstract

The literature on potential outcomes has shown that traditional methods for characterizing surrogate endpoints in clinical trials based only on observed quantities can fail to capture causal relationships between treatments, surrogates, and outcomes. Building on the potential-outcomes formulation of a principal surrogate, we introduce a Bayesian method to estimate the causal effect predictiveness (CEP) surface and quantify a candidate surrogate's utility for reliably predicting clinical outcomes. In considering the full joint distribution of all potentially observable quantities, our Bayesian approach has the following features. First, our approach illuminates implicit assumptions embedded in previously-used estimation strategies that have been shown to result in poor performance. Second, our approach provides tools for making explicit and scientifically-interpretable assumptions regarding associations about which observed data are not informative. Through simulations based on an HIV vaccine trial, we found that the Bayesian approach can produce estimates of the CEP surface with improved performance compared to previous methods. Third, our approach can extend principal-surrogate estimation beyond the previously considered setting of a vaccine trial where the candidate surrogate is constant in one arm of the study. We illustrate this extension through an application to an AIDS therapy trial where the candidate surrogate varies in both treatment arms.
© 2012, The International Biometric Society.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22348277      PMCID: PMC3860118          DOI: 10.1111/j.1541-0420.2011.01736.x

Source DB:  PubMed          Journal:  Biometrics        ISSN: 0006-341X            Impact factor:   2.571


  12 in total

1.  Principal stratification in causal inference.

Authors:  Constantine E Frangakis; Donald B Rubin
Journal:  Biometrics       Date:  2002-03       Impact factor: 2.571

Review 2.  Statistical evaluation of biomarkers as surrogate endpoints: a literature review.

Authors:  Christopher J Weir; Rosalind J Walley
Journal:  Stat Med       Date:  2006-01-30       Impact factor: 2.373

3.  Augmented designs to assess immune response in vaccine trials.

Authors:  Dean Follmann
Journal:  Biometrics       Date:  2006-12       Impact factor: 2.571

4.  ASSESSING SURROGATE ENDPOINTS IN VACCINE TRIALS WITH CASE-COHORT SAMPLING AND THE COX MODEL.

Authors:  Li Qin; Peter B Gilbert; Dean Follmann; Dongfeng Li
Journal:  Ann Appl Stat       Date:  2008-03       Impact factor: 2.083

5.  Principal stratification--uses and limitations.

Authors:  Tyler J Vanderweele
Journal:  Int J Biostat       Date:  2011-07-11       Impact factor: 0.968

6.  Surrogate endpoints in clinical trials: definition and operational criteria.

Authors:  R L Prentice
Journal:  Stat Med       Date:  1989-04       Impact factor: 2.373

7.  A controlled trial of two nucleoside analogues plus indinavir in persons with human immunodeficiency virus infection and CD4 cell counts of 200 per cubic millimeter or less. AIDS Clinical Trials Group 320 Study Team.

Authors:  S M Hammer; K E Squires; M D Hughes; J M Grimes; L M Demeter; J S Currier; J J Eron; J E Feinberg; H H Balfour; L R Deyton; J A Chodakewitz; M A Fischl
Journal:  N Engl J Med       Date:  1997-09-11       Impact factor: 91.245

8.  On the use of propensity scores in principal causal effect estimation.

Authors:  Booil Jo; Elizabeth A Stuart
Journal:  Stat Med       Date:  2009-10-15       Impact factor: 2.373

9.  A bayesian approach to surrogacy assessment using principal stratification in clinical trials.

Authors:  Yun Li; Jeremy M G Taylor; Michael R Elliott
Journal:  Biometrics       Date:  2009-08-10       Impact factor: 2.571

10.  Statistical identifiability and the surrogate endpoint problem, with application to vaccine trials.

Authors:  Julian Wolfson; Peter Gilbert
Journal:  Biometrics       Date:  2010-12       Impact factor: 2.571

View more
  12 in total

1.  Evaluating principal surrogate endpoints with time-to-event data accounting for time-varying treatment efficacy.

Authors:  Erin E Gabriel; Peter B Gilbert
Journal:  Biostatistics       Date:  2013-12-13       Impact factor: 5.899

2.  Surrogacy assessment using principal stratification when surrogate and outcome measures are multivariate normal.

Authors:  Anna S C Conlon; Jeremy M G Taylor; Michael R Elliott
Journal:  Biostatistics       Date:  2013-11-26       Impact factor: 5.899

3.  Surrogates of protection in repeated low-dose challenge experiments.

Authors:  Dustin M Long; Michael G Hudgens; Chih-Da Wu
Journal:  Stat Med       Date:  2015-01-28       Impact factor: 2.373

4.  Surrogate Endpoint Evaluation: Principal Stratification Criteria and the Prentice Definition.

Authors:  Peter B Gilbert; Erin E Gabriel; Ying Huang; Ivan S F Chan
Journal:  J Causal Inference       Date:  2015-02-01

5.  Post-randomization Biomarker Effect Modification Analysis in an HIV Vaccine Clinical Trial.

Authors:  Peter B Gilbert; Bryan S Blette; Bryan E Shepherd; Michael G Hudgens
Journal:  J Causal Inference       Date:  2020-07-25

6.  Comparing and combining biomarkers as principal surrogates for time-to-event clinical endpoints.

Authors:  Erin E Gabriel; Michael C Sachs; Peter B Gilbert
Journal:  Stat Med       Date:  2014-10-28       Impact factor: 2.373

7.  Surrogacy assessment using principal stratification with multivariate normal and Gaussian copula models.

Authors:  Jeremy M G Taylor; Anna S C Conlon; Michael R Elliott
Journal:  Clin Trials       Date:  2014-12-09       Impact factor: 2.486

8.  Latent class instrumental variables: a clinical and biostatistical perspective.

Authors:  Stuart G Baker; Barnett S Kramer; Karen S Lindeman
Journal:  Stat Med       Date:  2015-08-04       Impact factor: 2.373

9.  Surrogacy assessment using principal stratification and a Gaussian copula model.

Authors:  Asc Conlon; Jmg Taylor; M R Elliott
Journal:  Stat Methods Med Res       Date:  2016-07-11       Impact factor: 3.021

10.  Links between causal effects and causal association for surrogacy evaluation in a gaussian setting.

Authors:  Anna Conlon; Jeremy Taylor; Yun Li; Karla Diaz-Ordaz; Michael Elliott
Journal:  Stat Med       Date:  2017-08-08       Impact factor: 2.373

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.