Literature DB >> 22321828

A jumbo problem: mapping the structure and functions of the nuclear pore complex.

Javier Fernandez-Martinez1, Michael P Rout.   

Abstract

Macromolecular assemblies can be intrinsically refractive to classical structural analysis, due to their size, complexity, plasticity and dynamic nature. One such assembly is the nuclear pore complex (NPC). The NPC is formed from ∼450 copies of 30 different proteins, called nucleoporins, and is the sole mediator of exchange between the nucleus and the cytoplasm in eukaryotic cells. Despite significant progress, it has become increasingly clear that new approaches, integrating different sources of structural and functional data, will be needed to understand the functional biology of the NPC. Here, we discuss the latest approaches trying to address this challenge.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22321828      PMCID: PMC3472030          DOI: 10.1016/j.ceb.2011.12.013

Source DB:  PubMed          Journal:  Curr Opin Cell Biol        ISSN: 0955-0674            Impact factor:   8.382


  77 in total

Review 1.  Transport into and out of the nucleus.

Authors:  I G Macara
Journal:  Microbiol Mol Biol Rev       Date:  2001-12       Impact factor: 11.056

Review 2.  Virtual gating and nuclear transport: the hole picture.

Authors:  Michael P Rout; John D Aitchison; Marcelo O Magnasco; Brian T Chait
Journal:  Trends Cell Biol       Date:  2003-12       Impact factor: 20.808

3.  A mechanism for asymmetric segregation of age during yeast budding.

Authors:  Zhanna Shcheprova; Sandro Baldi; Stephanie Buvelot Frei; Gaston Gonnet; Yves Barral
Journal:  Nature       Date:  2008-07-27       Impact factor: 49.962

4.  Single-molecule transport across an individual biomimetic nuclear pore complex.

Authors:  Stefan W Kowalczyk; Larisa Kapinos; Timothy R Blosser; Tomás Magalhães; Pauline van Nies; Roderick Y H Lim; Cees Dekker
Journal:  Nat Nanotechnol       Date:  2011-06-19       Impact factor: 39.213

5.  Chromatin-bound nuclear pore components regulate gene expression in higher eukaryotes.

Authors:  Maya Capelson; Yun Liang; Roberta Schulte; William Mair; Ulrich Wagner; Martin W Hetzer
Journal:  Cell       Date:  2010-02-05       Impact factor: 41.582

6.  Artificial nanopores that mimic the transport selectivity of the nuclear pore complex.

Authors:  Tijana Jovanovic-Talisman; Jaclyn Tetenbaum-Novatt; Anna Sophia McKenney; Anton Zilman; Reiner Peters; Michael P Rout; Brian T Chait
Journal:  Nature       Date:  2008-12-21       Impact factor: 49.962

7.  Structural evidence for common ancestry of the nuclear pore complex and vesicle coats.

Authors:  Stephen G Brohawn; Nina C Leksa; Eric D Spear; Kanagalaghatta R Rajashankar; Thomas U Schwartz
Journal:  Science       Date:  2008-10-30       Impact factor: 47.728

Review 8.  Evolution: On a bender--BARs, ESCRTs, COPs, and finally getting your coat.

Authors:  Mark C Field; Andrej Sali; Michael P Rout
Journal:  J Cell Biol       Date:  2011-06-13       Impact factor: 10.539

9.  Evidence for a shared nuclear pore complex architecture that is conserved from the last common eukaryotic ancestor.

Authors:  Jeffrey A DeGrasse; Kelly N DuBois; Damien Devos; T Nicolai Siegel; Andrej Sali; Mark C Field; Michael P Rout; Brian T Chait
Journal:  Mol Cell Proteomics       Date:  2009-06-13       Impact factor: 5.911

10.  Proteomic analysis of the mammalian nuclear pore complex.

Authors:  Janet M Cronshaw; Andrew N Krutchinsky; Wenzhu Zhang; Brian T Chait; Michael J Matunis
Journal:  J Cell Biol       Date:  2002-08-26       Impact factor: 10.539

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  21 in total

1.  Nuclear pore heterogeneity influences HIV-1 infection and the antiviral activity of MX2.

Authors:  Melissa Kane; Stephanie V Rebensburg; Matthew A Takata; Trinity M Zang; Masahiro Yamashita; Mamuka Kvaratskhelia; Paul D Bieniasz
Journal:  Elife       Date:  2018-08-07       Impact factor: 8.140

2.  Effect of charge, hydrophobicity, and sequence of nucleoporins on the translocation of model particles through the nuclear pore complex.

Authors:  Mario Tagliazucchi; Orit Peleg; Martin Kröger; Yitzhak Rabin; Igal Szleifer
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-12       Impact factor: 11.205

Review 3.  The nuclear envelope: an intriguing focal point for neurogenetic disease.

Authors:  Howard J Worman; William T Dauer
Journal:  Neurotherapeutics       Date:  2014-10       Impact factor: 7.620

Review 4.  From hypothesis to mechanism: uncovering nuclear pore complex links to gene expression.

Authors:  Laura T Burns; Susan R Wente
Journal:  Mol Cell Biol       Date:  2014-03-10       Impact factor: 4.272

5.  Therapeutic potential of mitotic interaction between the nucleoporin Tpr and aurora kinase A.

Authors:  Akiko Kobayashi; Chieko Hashizume; Takayuki Dowaki; Richard W Wong
Journal:  Cell Cycle       Date:  2015       Impact factor: 4.534

Review 6.  Macromolecular transport between the nucleus and the cytoplasm: Advances in mechanism and emerging links to disease.

Authors:  Elizabeth J Tran; Megan C King; Anita H Corbett
Journal:  Biochim Biophys Acta       Date:  2014-08-09

7.  Revealing Higher Order Protein Structure Using Mass Spectrometry.

Authors:  Brian T Chait; Martine Cadene; Paul Dominic Olinares; Michael P Rout; Yi Shi
Journal:  J Am Soc Mass Spectrom       Date:  2016-04-14       Impact factor: 3.109

8.  Identification of CRM1-dependent Nuclear Export Cargos Using Quantitative Mass Spectrometry.

Authors:  Ketan Thakar; Samir Karaca; Sarah A Port; Henning Urlaub; Ralph H Kehlenbach
Journal:  Mol Cell Proteomics       Date:  2012-12-13       Impact factor: 5.911

9.  Several phenylalanine-glycine motives in the nucleoporin Nup214 are essential for binding of the nuclear export receptor CRM1.

Authors:  Stephanie Roloff; Christiane Spillner; Ralph H Kehlenbach
Journal:  J Biol Chem       Date:  2012-12-21       Impact factor: 5.157

Review 10.  Protein production from the structural genomics perspective: achievements and future needs.

Authors:  Steven C Almo; Scott J Garforth; Brandan S Hillerich; James D Love; Ronald D Seidel; Stephen K Burley
Journal:  Curr Opin Struct Biol       Date:  2013-05-01       Impact factor: 6.809

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