| Literature DB >> 22312475 |
Tomoyoshi Fuchise1, Haruo Sekizaki, Hideki Kishimura, Sappasith Klomklao, Sitthipong Nalinanon, Soottawat Benjakul, Byung-Soo Chun.
Abstract
Trypsin from the pyloric caeca of Pacific cod (Gadus macrocephalus) was easily prepared by affinity chromatography on Benzamidine Sepharose 6B and gel filtration on Superdex 75. Pacific cod trypsin was composed of three isozymes, and their molecular masses were estimated 23,756.34 Da, 23,939.62 Da, and 24,114.81 Da by desorption/ionization time-of-flight mass spectroscopy (MALDI/TOF-MS) and their isoelectric points (pIs) were approximately 5.1, 6.0, and 6.2, respectively. The isolated Pacific cod trypsin showed high similarity to other frigid-zone fish trypsins. The kinetic behavior of tryptic hydrolysis toward N-p-tosyl-L-arginine methyl ester hydrochloride (TAME), N-benzoyl-L-arginine p-nitroanilide hydrochloride (BAPA), and p-amidinophenyl ester were also analyzed. In addition, the cod trypsin-catalyzed dipeptide synthesis was investigated using twelve series of "inverse subdtrates" that is p- and m-isomer of amidinophenyl, guanidinophenyl, (amidinomethyl)phenyl, (guanidinomethyl)phenyl, and four position isomers of guanidinonaphtyl esters derived from N-(tert-butoxycarbonyl)amino acid as acyl donor components. They were found to couple with an acyl acceptor such as L-alanine p-nitroanilide to produce dipeptide in the presence of the trypsin. All inverse substrates tested in this study undergo less enantioselective coupling reaction. The p-guanidinophenyl ester was most practical substrate in twelve series tested. The enzymatic hydrolysis of the resulting products was negligible.Entities:
Year: 2011 PMID: 22312475 PMCID: PMC3268023 DOI: 10.4061/2011/912382
Source DB: PubMed Journal: J Amino Acids ISSN: 2090-0112
Figure 1Structure of inverse substrates.
Scheme 1Enzymatic peptide synthesis using inverse substrate.
Figure 2Reaction process of trypsin-catalyzed peptide bond formation with inverse substrate.
Purification of trypsin from Pacific cod.
| Purification stages | Protein (mg) | Total activity (U) | Specific activity (U/mg) | Purity (fold) | Yield (%) |
|---|---|---|---|---|---|
| Activated crude extract | 503 | 5,281 | 10.5 | 1.0 | 100 |
| 80% (NH4)2SO4 fraction | 424 | 5,217 | 12.3 | 1.2 | 99 |
| Gel filtration | 17.8 | 3,400 | 191 | 18 | 64 |
Figure 3SDS-PAGE and IEF of purified Pacific cod trypsin. (a) SDS-PAGE of purified Pacific cod trypsin. Lane 1 contains protein standards; egg albumin (molecular weight, 45.0 kDa), bovine pancreatic trypsinogen (24.0 kDa), bovine milk β-lactoglobulin (18.4 kDa), and egg white lysozyme (14.3 kDa). (b) IEF of purified Pacific cod trypsin. Lane 1 contains purified Pacific cod trypsin. Lane 2 contains IEF isoelectric point (pI) standards: phycocyanin (pI 4.45, 4.65, 4.75), β-lactoglobulin (5.1), bovine carbonic anhydrase (6.0), human carbonic anhydrase (6.5), equine myoglobin (6.8, 7.0), human hemoglobin (7.1), lentil lectin (7.8, 8.0, 8.23), and cytochrome c (9.6).
Figure 4MALDI/TOF-MS spectrum of purified Pacific cod trypsin.
Enzymatic properties of Pacific cod trypsin.
| Enzymatic properties | Pacific cod trypsin |
|---|---|
| Optimum pH | pH 8.0 |
| Optimum temperature | 50°C |
| pH stability | pH 7.0–10.0 |
| Thermal stability | <40°C |
Kinetic parameters for Pacific cod trypsin-catalyzed hydrolysis.
| Substrate | Parameter | PcT | BT | PcT/BT |
|---|---|---|---|---|
| BAPA |
| 0.037 | 0.57 | 0.063 |
|
| 3.7 | 1.7 | 2.2 | |
|
| 100 | 2.9 | 35 | |
|
| ||||
| TAME |
| 0.0015 | 0.021 | 0.074 |
|
| 108 | 86 | 1.3 | |
|
| 71,206 | 4,160 | 17 | |
|
| ||||
|
|
| 0.0015 | 0.021 | 0.071 |
|
| 2.0 | 1.2 | 1.6 | |
|
| 1,449 | 619 | 2.3 | |
PcT, Pacific cod trypsin; BT, Bovine trypsin.
Yield of Pacific cod trypsin-catalyzed peptide synthesis.
| Entry no. | Acyl donor (no.) | Reaction time (hr) | Product (No.) | Yield (%) |
|---|---|---|---|---|
| 1 |
| 48 |
| 44 |
| 2 |
| 24 |
| 37 |
| 3 |
| 24 |
| 55 |
| 4 |
| 12 |
| 51 |
| 5 |
| 0.2 |
| 58 |
| 6 |
| 0.2 |
| 60 |
| 7 |
| 5 |
| 59 |
| 8 |
| 5 |
| 59 |
| 9 |
| 5 |
| 56 |
| 10 |
| 5 |
| 55 |
| 11 |
| 24 |
| 52 |
| 12 |
| 50 |
| 59 |
| 13 |
| 74 |
| 12 |
| 14 |
| 74 |
| 52 |
| 15 |
| 74 |
| 38 |
| 16 |
| 74 |
| 58 |
| 17 |
| 0.2 |
| 70 |
| 18 |
| 0.2 |
| 75 |
| 19 |
| 8 |
| 76 |
| 20 |
| 48 |
| 74 |
| 21 |
| 5 |
| 57 |
| 22 |
| 97 |
| 61 |
| 23 |
| 97 |
| 33 |
| 24 |
| 74 |
| 23 |
1 mM acyl donor, 20 mM acyl acceptor, 10 μM PcT, respectively, in MOPS (50 mM, pH 8.0, containing 20 mM CaCl2) : DMSO = 1 : 1, at 25°C.