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Literature DB >> 22308479

RNA modeling, naturally.

Eric Westhof¹.

Abstract

Mesh：

Year: 2012 PMID： 22308479 PMCID： PMC3286913 DOI： 10.1073/pnas.1121363109

Source DB: PubMed Journal: Proc Natl Acad Sci U S A ISSN： 0027-8424 Impact factor: 11.205

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22 in total

1. RNA-Puzzles: a CASP-like evaluation of RNA three-dimensional structure prediction.

Authors: José Almeida Cruz; Marc-Frédérick Blanchet; Michal Boniecki; Janusz M Bujnicki; Shi-Jie Chen; Song Cao; Rhiju Das; Feng Ding; Nikolay V Dokholyan; Samuel Coulbourn Flores; Lili Huang; Christopher A Lavender; Véronique Lisi; François Major; Katarzyna Mikolajczak; Dinshaw J Patel; Anna Philips; Tomasz Puton; John Santalucia; Fredrick Sijenyi; Thomas Hermann; Kristian Rother; Magdalena Rother; Alexander Serganov; Marcin Skorupski; Tomasz Soltysinski; Parin Sripakdeevong; Irina Tuszynska; Kevin M Weeks; Christina Waldsich; Michael Wildauer; Neocles B Leontis; Eric Westhof
Journal: RNA Date: 2012-02-23 Impact factor: 4.942

RNA modeling, naturally.

1. RNA-Puzzles: a CASP-like evaluation of RNA three-dimensional structure prediction.

2. Building programmable jigsaw puzzles with RNA.

3. Topology of three-way junctions in folded RNAs.

4. The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data.

5. FR3D: finding local and composite recurrent structural motifs in RNA 3D structures.

6. Accurate SHAPE-directed RNA structure determination.

7. The dynamic landscapes of RNA architecture.

8. iFoldRNA: three-dimensional RNA structure prediction and folding.

9. The global folding of four-way helical junctions in RNA, including that in U1 snRNA.

10. Atomic accuracy in predicting and designing noncanonical RNA structure.

Review 1. Engineering RNA-binding proteins for biology.