Literature DB >> 22285553

Mathematical modeling of monoclonal conversion in the colonic crypt.

Alexander G Fletcher1, Christopher J W Breward, S Jonathan Chapman.   

Abstract

A novel spatial multiscale model of a colonic crypt is described, which couples the cell cycle (including cell division) with the mechanics of cell movement. The model is used to investigate the process of monoclonal conversion under two hypotheses concerning stem cell behavior. Under the first hypothesis, 'stem-ness' is an intrinsic cell property, and the stem cell population is maintained through asymmetric division. Under the second hypothesis, the proliferative behavior of each cell is governed by its microenvironment through a biochemical signalling cue, and all cell division is symmetric. Under each hypothesis, the model is used to run virtual experiments, in which a harmless labeling mutation is bestowed upon a single cell in the crypt and the mutant clonal population is tracked over time to check if and when the crypt becomes monoclonal. It is shown that under the first hypothesis, a stable structured cell population is not possible without some form of population-dependent feedback; in contrast, under the second hypothesis, a stable crypt architecture arises naturally. Through comparison with an existing spatial crypt model and a non-spatial stochastic population model, it is shown that the spatial structure of the crypt has a significant effect on the time scale over which a crypt becomes monoclonal. Copyright Â
© 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22285553     DOI: 10.1016/j.jtbi.2012.01.021

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  30 in total

1.  Multi-scale modeling of APC and [Formula: see text]-catenin regulation in the human colonic crypt.

Authors:  Brooks Emerick; Gilberto Schleiniger; Bruce M Boman
Journal:  J Math Biol       Date:  2018-01-04       Impact factor: 2.259

2.  Parameter-free methods distinguish Wnt pathway models and guide design of experiments.

Authors:  Adam L MacLean; Zvi Rosen; Helen M Byrne; Heather A Harrington
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-17       Impact factor: 11.205

3.  Asymmetric cell division-dominant neutral drift model for normal intestinal stem cell homeostasis.

Authors:  Yoshitatsu Sei; Jianying Feng; Carson C Chow; Stephen A Wank
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2018-10-25       Impact factor: 4.052

Review 4.  Towards personalized computational oncology: from spatial models of tumour spheroids, to organoids, to tissues.

Authors:  Aleksandra Karolak; Dmitry A Markov; Lisa J McCawley; Katarzyna A Rejniak
Journal:  J R Soc Interface       Date:  2018-01       Impact factor: 4.118

5.  The formation of tight tumor clusters affects the efficacy of cell cycle inhibitors: a hybrid model study.

Authors:  Munju Kim; Damon Reed; Katarzyna A Rejniak
Journal:  J Theor Biol       Date:  2014-03-05       Impact factor: 2.691

6.  Understand the Functions of Scaffold Proteins in Cell Signaling by a Mesoscopic Simulation Method.

Authors:  Zhaoqian Su; Kalyani Dhusia; Yinghao Wu
Journal:  Biophys J       Date:  2020-10-14       Impact factor: 4.033

7.  Establishment of maternal blood supply to the placenta: insights into plugging, unplugging and trophoblast behaviour from an agent-based model.

Authors:  Rojan Saghian; Gib Bogle; Joanna L James; Alys R Clark
Journal:  Interface Focus       Date:  2019-08-16       Impact factor: 3.906

Review 8.  Unraveling intestinal stem cell behavior with models of crypt dynamics.

Authors:  Alexis J Carulli; Linda C Samuelson; Santiago Schnell
Journal:  Integr Biol (Camb)       Date:  2014-01-30       Impact factor: 2.192

Review 9.  Colorectal cancer through simulation and experiment.

Authors:  Sophie K Kershaw; Helen M Byrne; David J Gavaghan; James M Osborne
Journal:  IET Syst Biol       Date:  2013-06       Impact factor: 1.615

10.  Chaste: an open source C++ library for computational physiology and biology.

Authors:  Gary R Mirams; Christopher J Arthurs; Miguel O Bernabeu; Rafel Bordas; Jonathan Cooper; Alberto Corrias; Yohan Davit; Sara-Jane Dunn; Alexander G Fletcher; Daniel G Harvey; Megan E Marsh; James M Osborne; Pras Pathmanathan; Joe Pitt-Francis; James Southern; Nejib Zemzemi; David J Gavaghan
Journal:  PLoS Comput Biol       Date:  2013-03-14       Impact factor: 4.475

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