Literature DB >> 22278943

Structural insight into RNA recognition motifs: versatile molecular Lego building blocks for biological systems.

Yutaka Muto1, Shigeyuki Yokoyama.   

Abstract

'RNA recognition motifs (RRMs)' are common domain-folds composed of 80-90 amino-acid residues in eukaryotes, and have been identified in many cellular proteins. At first they were known as RNA binding domains. Through discoveries over the past 20 years, however, the RRMs have been shown to exhibit versatile molecular recognition activities and to behave as molecular Lego building blocks to construct biological systems. Novel RNA/protein recognition modes by RRMs are being identified, and more information about the molecular recognition by RRMs is becoming available. These RNA/protein recognition modes are strongly correlated with their biological significance. In this review, we would like to survey the recent progress on these versatile molecular recognition modules.
Copyright © 2012 John Wiley & Sons, Ltd.

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Year:  2012        PMID: 22278943     DOI: 10.1002/wrna.1107

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev RNA        ISSN: 1757-7004            Impact factor:   9.957


  29 in total

1.  Structural study of the Fox-1 RRM protein hydration reveals a role for key water molecules in RRM-RNA recognition.

Authors:  Miroslav Krepl; Markus Blatter; Antoine Cléry; Fred F Damberger; Frédéric H T Allain; Jiri Sponer
Journal:  Nucleic Acids Res       Date:  2017-07-27       Impact factor: 16.971

Review 2.  Evolutionary conservation and expression of human RNA-binding proteins and their role in human genetic disease.

Authors:  Stefanie Gerstberger; Markus Hafner; Manuel Ascano; Thomas Tuschl
Journal:  Adv Exp Med Biol       Date:  2014       Impact factor: 2.622

3.  Distinct RNA-binding modules in a single PUF protein cooperate to determine RNA specificity.

Authors:  Chen Qiu; Robert C Dutcher; Douglas F Porter; Yoav Arava; Marvin Wickens; Traci M Tanaka Hall
Journal:  Nucleic Acids Res       Date:  2019-09-19       Impact factor: 16.971

4.  Mip6 binds directly to the Mex67 UBA domain to maintain low levels of Msn2/4 stress-dependent mRNAs.

Authors:  Manuel Martín-Expósito; Maria-Eugenia Gas; Nada Mohamad; Carme Nuño-Cabanes; Ana Tejada-Colón; Pau Pascual-García; Lorena de la Fuente; Belén Chaves-Arquero; Jonathan Merran; Jeffry Corden; Ana Conesa; José Manuel Pérez-Cañadillas; Jerónimo Bravo; Susana Rodríguez-Navarro
Journal:  EMBO Rep       Date:  2019-11-03       Impact factor: 8.807

5.  Exploring the molecular basis of RNA recognition by the dimeric RNA-binding protein via molecular simulation methods.

Authors:  Shan Chang; Da-Wei Zhang; Lei Xu; Hua Wan; Ting-Jun Hou; Ren Kong
Journal:  RNA Biol       Date:  2016-09-03       Impact factor: 4.652

Review 6.  The potential of engineered eukaryotic RNA-binding proteins as molecular tools and therapeutics.

Authors:  Carl R Shotwell; John D Cleary; J Andrew Berglund
Journal:  Wiley Interdiscip Rev RNA       Date:  2019-11-03       Impact factor: 9.957

Review 7.  Engineering RNA-binding proteins for biology.

Authors:  Yu Chen; Gabriele Varani
Journal:  FEBS J       Date:  2013-07-05       Impact factor: 5.542

Review 8.  xRRM: a new class of RRM found in the telomerase La family protein p65.

Authors:  Mahavir Singh; Charles P Choi; Juli Feigon
Journal:  RNA Biol       Date:  2013-01-17       Impact factor: 4.652

9.  hLARP7 C-terminal domain contains an xRRM that binds the 3' hairpin of 7SK RNA.

Authors:  Catherine D Eichhorn; Rahul Chug; Juli Feigon
Journal:  Nucleic Acids Res       Date:  2016-09-26       Impact factor: 16.971

Review 10.  The sweet side of RNA regulation: glyceraldehyde-3-phosphate dehydrogenase as a noncanonical RNA-binding protein.

Authors:  Michael R White; Elsa D Garcin
Journal:  Wiley Interdiscip Rev RNA       Date:  2015-11-12       Impact factor: 9.957

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